contig_metadata
12 rows where bioproject = "PRJNA1264536" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6156785 | 6156785 | PRJNA1264536_P_NODE_2625_length_347_cov_1.138686_g2551_i0 | PRJNA1264536 | 2625 | 347 | 1.138686 | 3.95124042 | Cutibacterium | 1912216 | Bacteria | Bacteria | 641 | 1.5299999999999996e-179 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g2551 | i0 | 100 | 271.881844380403 | 347 | 0 | 100 | 0 | 1 | 347 | 57055 | 56709 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 94343 | 641 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 9982128 | 9982128 | PRJNA1264536_P_NODE_5268_length_244_cov_0.912281_g5194_i0 | PRJNA1264536 | 5268 | 244 | 0.912281 | 2.22596564 | Actinomycetota bacterium | 2900548 | Bacteria | Bacteria | 149 | 9.36e-45 | NR | MFM7526076.1 | 2900548 | g5194 | i0 | 98.7 | 2.87704918032787 | 78 | 1 | 95.9 | 0 | 237 | 4 | 1 | 78 | MFM7526076.1 NAD(P)-dependent oxidoreductase [Actinomycetota bacterium] | diamond | 702 | 149 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetota bacterium | ||||||
| 16941184 | 16941184 | PRJNA1264536_P_NODE_4974_length_247_cov_0.896552_g4900_i0 | PRJNA1264536 | 4974 | 247 | 0.896552 | 2.21448344 | Kitasatospora aureofaciens | 1894 | Bacteria | Bacteria | 446 | 8.759999999999998e-121 | NTclustered | gi|1175678048|gb|CP020567.1| | 1894 | g4900 | i0 | 99.19 | 27.6842105263158 | 247 | 2 | 100 | 0 | 1 | 247 | 1300372 | 1300126 | Kitasatospora aureofaciens strain DM-1, complete genome | blastn | 6838 | 446 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Kitasatospora | Kitasatospora aureofaciens | ||
| 20180107 | 20180107 | PRJNA1264536_P_NODE_4876_length_248_cov_0.891429_g4802_i0 | PRJNA1264536 | 4876 | 248 | 0.891429 | 2.21074392 | Brevibacterium | 1696 | Bacteria | Bacteria | 453 | 5.2600000000000005e-123 | NTclustered | gi|1013855561|gb|CP014869.1| | 1703 | g4802 | i0 | 99.597 | 371.758064516129 | 248 | 1 | 100 | 0 | 1 | 248 | 831242 | 831489 | Brevibacterium linens strain BS258 chromosome, complete genome | blastn | 92196 | 453 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Brevibacteriaceae | Brevibacterium | Brevibacterium linens | ||
| 24590195 | 24590195 | PRJNA1264536_P_NODE_4340_length_253_cov_0.866667_g4266_i0 | PRJNA1264536 | 4340 | 253 | 0.866667 | 2.19266751 | Actinocatenispora sera | 390989 | Bacteria | Bacteria | 300 | 7.43e-77 | NTclustered | gi|2020954569|dbj|AP023354.1| | 390989 | g4266 | i0 | 88.664 | 1.97233201581028 | 247 | 26 | 97 | 2 | 4 | 249 | 2534309 | 2534064 | Actinocatenispora sera NBRC 101916 DNA, complete genome | blastn | 499 | 300 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micromonosporales | Micromonosporaceae | Actinocatenispora | Actinocatenispora sera | ||
| 28431970 | 28431970 | PRJNA1264536_P_NODE_4586_length_251_cov_0.876404_g4512_i0 | PRJNA1264536 | 4586 | 251 | 0.876404 | 2.19977404 | Actinomycetes bacterium | 1883427 | Bacteria | Bacteria | 157 | 2.32e-46 | NR | GDX19034.1 | 1883427 | g4512 | i0 | 96.4 | 0.99203187250996006 | 83 | 3 | 99.2 | 0 | 249 | 1 | 149 | 231 | GDX19034.1 hypothetical protein LBMAG06_11630 [Actinomycetes bacterium] | diamond | 249 | 157 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Actinomycetes bacterium | |||||
| 29032057 | 29032057 | PRJNA1264536_P_NODE_4348_length_253_cov_0.866667_g4274_i0 | PRJNA1264536 | 4348 | 253 | 0.866667 | 2.19266751 | Actinomycetota bacterium | 2900548 | Bacteria | Bacteria | 92.8 | 1.19e-20 | NR | MCA1681223.1 | 2900548 | g4274 | i0 | 82.4 | 0.604743083003953 | 51 | 9 | 60.5 | 0 | 155 | 3 | 1 | 51 | MCA1681223.1 IS5 family transposase [Actinomycetota bacterium] | diamond | 153 | 92.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetota bacterium | ||||||
| 30091532 | 30091532 | PRJNA1264536_P_NODE_4852_length_248_cov_0.891429_g4778_i0 | PRJNA1264536 | 4852 | 248 | 0.891429 | 2.21074392 | Trebonia | 2767073 | Bacteria | Bacteria | 133 | 1.66e-34 | NR | MCW2891044.1 | 1883427 | g4778 | i0 | 73.2 | 1.98387096774194 | 82 | 22 | 99.2 | 0 | 1 | 246 | 409 | 490 | MCW2891044.1 hypothetical protein [Actinomycetes bacterium] | diamond | 492 | 133 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Actinomycetes bacterium | |||||
| 30516208 | 30516208 | PRJNA1264536_P_NODE_5333_length_244_cov_0.912281_g5259_i0 | PRJNA1264536 | 5333 | 244 | 0.912281 | 2.22596564 | Acidimicrobiia bacterium | 2080302 | Bacteria | Bacteria | 126 | 7.589999999999999e-32 | NR | MFM8265162.1 | 2080302 | g5259 | i0 | 87.3 | 0.971311475409836 | 79 | 9 | 97.1 | 1 | 242 | 6 | 161 | 238 | MFM8265162.1 trypsin-like serine protease [Acidimicrobiia bacterium] | diamond | 237 | 126 | 1 | Bacteria | Bacillati | Actinomycetota | Acidimicrobiia | Acidimicrobiia bacterium | |||||
| 31306154 | 31306154 | PRJNA1264536_P_NODE_5395_length_243_cov_0.917647_g5321_i0 | PRJNA1264536 | 5395 | 243 | 0.917647 | 2.22988221 | Solirubrobacteraceae bacterium | 2586742 | Bacteria | Bacteria | 98.6 | 5.72e-23 | NR | HEY7890830.1 | 2586742 | g5321 | i0 | 86 | 0.703703703703704 | 57 | 6 | 70.4 | 1 | 242 | 72 | 57 | 111 | HEY7890830.1 SigB/SigF/SigG family RNA polymerase sigma factor [Solirubrobacteraceae bacterium] | diamond | 171 | 98.6 | 1 | Bacteria | Bacillati | Actinomycetota | Thermoleophilia | Solirubrobacterales | Solirubrobacteraceae | Solirubrobacteraceae bacterium | |||
| 31482503 | 31482503 | PRJNA1264536_P_NODE_5396_length_243_cov_0.917647_g5322_i0 | PRJNA1264536 | 5396 | 243 | 0.917647 | 2.22988221 | Actinomycetes | 1760 | Bacteria | Bacteria | 87 | 7.85e-18 | NR | HET7668478.1 | 1785 | g5322 | i0 | 80.9 | 2.34567901234568 | 47 | 9 | 58 | 0 | 242 | 102 | 409 | 455 | HET7668478.1 menaquinone biosynthesis decarboxylase [Mycobacterium sp.] | diamond | 570 | 87 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Mycobacterium sp. | ||
| 32558139 | 32558139 | PRJNA1264536_P_NODE_2039_length_398_cov_0.960000_g1965_i0 | PRJNA1264536 | 2039 | 398 | 0.96 | 3.8208 | root | 1 | Root_unresolved | Root_unresolved | 70.1 | 5.37e-11 | NR | MCW2763450.1 | 1909296 | g1965 | i0 | 44.4 | 1.50753768844221 | 72 | 38 | 54.3 | 1 | 397 | 182 | 258 | 327 | MCW2763450.1 hypothetical protein [Marmoricola sp.] | diamond | 600 | 70.5 | 0.994326241134752 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Nocardioidaceae | Marmoricola | Marmoricola sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;