RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1264536", tax_kingdom = "Metazoa" and tax_phylum = "Brachiopoda"

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tax_superkingdom 1

tax_phylum 1

  • Brachiopoda · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1264536 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27516260 27516260 PRJNA1264536_P_NODE_4523_length_251_cov_1.314607_g4449_i0 PRJNA1264536 4523 251 1.314607 3.29966357 Lingula anatina 7574 Brachiopoda other_Eukaryota 81.3 1.14e-15   NR XP_013421710.1 7574 g4449 i0 47.1 1.01593625498008 85 43 99.2 1 1 249 101 185 XP_013421710.1 BSD domain-containing protein 1 [Lingula anatina] diamond 255 81.3 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
27534101 27534101 PRJNA1264536_P_NODE_5263_length_244_cov_0.912281_g5189_i0 PRJNA1264536 5263 244 0.912281 2.22596564 Metazoa 33208 Brachiopoda other_Eukaryota 57.8 1.96e-7   NR XP_013386632.1 7574 g5189 i0 40.5 5.61885245901639 74 39 88.5 2 244 29 1122 1192 XP_013386632.1 folliculin-interacting protein 1 isoform X2 [Lingula anatina] diamond 1371 58.2 0.993127147766323 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;