RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1264536", tax_kingdom = "Fungi" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1264536 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26693983 26693983 PRJNA1264536_P_NODE_4721_length_250_cov_0.875706_g4647_i0 PRJNA1264536 4721 250 0.875706 2.189265 Spizellomyces punctatus DAOM BR117 645134 Fungi Fungi 55.5 1.34e-6   NR XP_016606844.1 645134 g4647 i0 36.8 1.728 76 40 91.2 1 245 18 302 369 XP_016606844.1 uncharacterized protein SPPG_05782 [Spizellomyces punctatus DAOM BR117] diamond 432 55.5 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
30642462 30642462 PRJNA1264536_P_NODE_5473_length_242_cov_0.923077_g5399_i0 PRJNA1264536 5473 242 0.923077 2.23384634 Batrachochytrium salamandrivorans 1357716 Fungi Fungi 135 2.93e-36   NR KAH9249811.1 1357716 g5399 i0 73.8 0.991735537190083 80 21 99.2 0 3 242 52 131 KAH9249811.1 hypothetical protein BASA81_012406 [Batrachochytrium salamandrivorans] diamond 240 135 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium salamandrivorans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;