RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1264536", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1264536 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10567976 10567976 PRJNA1264536_P_NODE_2689_length_342_cov_1.159851_g2615_i0 PRJNA1264536 2689 342 1.159851 3.96669042 Plasmodium yoelii 5861 SAR_Eukaryotes SAR_Eukaryotes 276 1.76e-69   NTclustered gi|1270520602|ref|XM_022956109.1| 5861 g2615 i0 82.951 30.9970760233918 305 52 89 0 2 306 305 1 Plasmodium yoelii histone H4, putative (PY17X_0944400), partial mRNA blastn 10601 276 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium yoelii
27674330 27674330 PRJNA1264536_P_NODE_5324_length_244_cov_0.912281_g5250_i0 PRJNA1264536 5324 244 0.912281 2.22596564 Eimeria tenella 5802 SAR_Eukaryotes SAR_Eukaryotes 68.9 2.19e-11   NR XP_013233911.1 5802 g5250 i0 48.1 2.88934426229508 77 40 94.7 0 242 12 274 350 XP_013233911.1 ankyrin repeat-containing protein, putative [Eimeria tenella] diamond 705 68.9 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
28796843 28796843 PRJNA1264536_P_NODE_3707_length_284_cov_1.109005_g3633_i0 PRJNA1264536 3707 284 1.109005 3.1495742 Apicomplexa 5794 SAR_Eukaryotes SAR_Eukaryotes 100 4.31e-22   NR XP_026194024.1 88456 g3633 i0 48.9 7.84859154929577 94 48 99.3 0 2 283 421 514 XP_026194024.1 SCO-spondin, partial [Cyclospora cayetanensis] diamond 2229 101 0.99009900990099 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;