contig_metadata
39 rows where bioproject = "PRJNA1263632" and tax_phylum = "Pseudomonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2914377 | 2914377 | PRJNA1263632_P_NODE_3183_length_344_cov_1.487085_g3165_i0 | PRJNA1263632 | 3183 | 344 | 1.487085 | 5.1155724 | Kaistia sp. 32K | 2795690 | Bacteria | Bacteria | 411 | 4.6599999999999996e-110 | NTclustered | gi|1952965593|dbj|AP024269.1| | 2795690 | g3165 | i0 | 88.889 | 95.546511627907 | 333 | 37 | 97 | 0 | 3 | 335 | 1091041 | 1091373 | Kaistia sp. 32K DNA, complete genome | blastn | 32868 | 411 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Kaistiaceae | Kaistia | Kaistia sp. 32K | ||
| 3604474 | 3604474 | PRJNA1263632_P_NODE_1283_length_529_cov_1.061404_g1265_i0 | PRJNA1263632 | 1283 | 529 | 1.061404 | 5.61482716 | Stenotrophomonas | 40323 | Bacteria | Bacteria | 946 | 0 | NTclustered | gi|1043539118|gb|KX094369.1| | 83617 | g1265 | i0 | 99.053 | 327.444234404537 | 528 | 4 | 99 | 1 | 1 | 528 | 1153 | 1679 | Stenotrophomonas nitritireducens strain KACC 10891 23S ribosomal RNA gene, partial sequence | blastn | 173218 | 953 | 0.992654774396642 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Stenotrophomonas | Stenotrophomonas nitritireducens | ||
| 4190803 | 4190803 | PRJNA1263632_P_NODE_4244_length_302_cov_1.279476_g4226_i0 | PRJNA1263632 | 4244 | 302 | 1.279476 | 3.86401752 | Aquabacterium olei | 1296669 | Bacteria | Bacteria | 448 | 3.0699999999999995e-121 | NTclustered | gi|1387992375|gb|CP029210.1| | 1296669 | g4226 | i0 | 93.667 | 205.774834437086 | 300 | 18 | 99 | 1 | 1 | 299 | 276990 | 277289 | Aquabacterium olei strain NBRC 110486 chromosome, complete genome | blastn | 62144 | 448 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Aquabacterium | Aquabacterium olei | |||
| 6156765 | 6156765 | PRJNA1263632_P_NODE_1185_length_551_cov_1.399582_g1167_i0 | PRJNA1263632 | 1185 | 551 | 1.399582 | 7.71169682 | Sphingomonas | 13687 | Bacteria | Bacteria | 893 | 0 | NTclustered | gi|1943313950|gb|CP065713.1| | 13689 | g1167 | i0 | 96.168 | 204.573502722323 | 548 | 18 | 99 | 3 | 4 | 550 | 1417986 | 1417441 | Sphingomonas paucimobilis strain FDAARGOS_881 chromosome, complete genome | blastn | 112720 | 900 | 0.992222222222222 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas paucimobilis | ||
| 6741483 | 6741483 | PRJNA1263632_P_NODE_4486_length_295_cov_1.387387_g4468_i0 | PRJNA1263632 | 4486 | 295 | 1.387387 | 4.09279165 | Phyllobacterium meliloti | 555317 | Bacteria | Bacteria | 292 | 1.4799999999999999e-74 | NTclustered | gi|2165295635|gb|CP088274.1| | 555317 | g4468 | i0 | 86.692 | 19.7898305084746 | 263 | 35 | 89 | 0 | 33 | 295 | 187036 | 187298 | Phyllobacterium sp. T1293 plasmid pT1293a, complete sequence | blastn | 5838 | 292 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Phyllobacteriaceae | Phyllobacterium | Phyllobacterium meliloti | ||
| 6741535 | 6741535 | PRJNA1263632_P_NODE_6306_length_252_cov_1.715084_g6288_i0 | PRJNA1263632 | 6306 | 252 | 1.715084 | 4.32201168 | Vogesella sp. XCS3 | 2877939 | Bacteria | Bacteria | 466 | 6.89e-127 | NTclustered | gi|2124242701|gb|CP085530.1| | 2877939 | g6288 | i0 | 100 | 444.071428571429 | 252 | 0 | 100 | 0 | 1 | 252 | 78036 | 78287 | Vogesella sp. XCS3 chromosome, complete genome | blastn | 111906 | 466 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Neisseriales | Chromobacteriaceae | Vogesella | Vogesella sp. XCS3 | ||
| 7431966 | 7431966 | PRJNA1263632_P_NODE_7346_length_246_cov_0.890173_g7328_i0 | PRJNA1263632 | 7346 | 246 | 0.890173 | 2.18982558 | root | 1 | Root_unresolved | Root_unresolved | 54.7 | 0.006 | NTclustered | gi|2792232668|gb|CP121065.1| | 171437 | g7328 | i0 | 100 | 0.41869918699187 | 29 | 0 | 12 | 0 | 217 | 245 | 1875483 | 1875455 | Tistrella mobilis strain L1 chromosome, complete genome | blastn | 103 | 54.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Geminicoccales | Geminicoccaceae | Tistrella | Tistrella mobilis | ||
| 8706797 | 8706797 | PRJNA1263632_P_NODE_4987_length_282_cov_1.923445_g4969_i0 | PRJNA1263632 | 4987 | 282 | 1.923445 | 5.4241149 | Moraxellaceae | 468 | Bacteria | Bacteria | 520 | 5.93e-143 | NTclustered | gi|1985959268|gb|CP069437.1| | 34062 | g4969 | i0 | 100 | 345.989361702128 | 281 | 0 | 99 | 0 | 2 | 282 | 1497416 | 1497696 | Moraxella osloensis strain FDAARGOS_1202 chromosome, complete genome | blastn | 97569 | 520 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Moraxellales | Moraxellaceae | Faucicola | Faucicola osloensis | ||
| 10567902 | 10567902 | PRJNA1263632_P_NODE_7409_length_246_cov_0.890173_g7391_i0 | PRJNA1263632 | 7409 | 246 | 0.890173 | 2.18982558 | Phyllobacterium meliloti | 555317 | Bacteria | Bacteria | 377 | 3.2300000000000003e-100 | NTclustered | gi|2165292098|gb|CP088273.1| | 555317 | g7391 | i0 | 94.309 | 7.61382113821138 | 246 | 14 | 100 | 0 | 1 | 246 | 262695 | 262450 | Phyllobacterium sp. T1293 chromosome, complete genome | blastn | 1873 | 377 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Phyllobacteriaceae | Phyllobacterium | Phyllobacterium meliloti | ||
| 11842314 | 11842314 | PRJNA1263632_P_NODE_2550_length_381_cov_1.376623_g2532_i0 | PRJNA1263632 | 2550 | 381 | 1.376623 | 5.24493363 | Phyllobacterium sp. 628 | 2718938 | Bacteria | Bacteria | 311 | 5.43e-80 | NTclustered | gi|1890482075|gb|CP050300.1| | 2718938 | g2532 | i0 | 83.432 | 0.887139107611549 | 338 | 52 | 88 | 2 | 46 | 381 | 53003 | 52668 | Phyllobacterium sp. 628 plasmid p_3, complete sequence | blastn | 338 | 311 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Phyllobacteriaceae | Phyllobacterium | Phyllobacterium sp. 628 | ||
| 11842421 | 11842421 | PRJNA1263632_P_NODE_6310_length_252_cov_1.620112_g6292_i0 | PRJNA1263632 | 6310 | 252 | 1.620112 | 4.08268224 | Phyllobacterium meliloti | 555317 | Bacteria | Bacteria | 206 | 1.66e-48 | NTclustered | gi|2165292098|gb|CP088273.1| | 555317 | g6292 | i0 | 84.332 | 3.34126984126984 | 217 | 26 | 85 | 5 | 40 | 252 | 1198677 | 1198889 | Phyllobacterium sp. T1293 chromosome, complete genome | blastn | 842 | 206 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Phyllobacteriaceae | Phyllobacterium | Phyllobacterium meliloti | ||
| 13117567 | 13117567 | PRJNA1263632_P_NODE_5011_length_282_cov_1.105263_g4993_i0 | PRJNA1263632 | 5011 | 282 | 1.105263 | 3.11684166 | Phyllobacterium meliloti | 555317 | Bacteria | Bacteria | 265 | 3.0699999999999996e-66 | NTclustered | gi|2165292098|gb|CP088273.1| | 555317 | g4993 | i0 | 89.151 | 26.4326241134752 | 212 | 23 | 79 | 0 | 71 | 282 | 1823975 | 1824186 | Phyllobacterium sp. T1293 chromosome, complete genome | blastn | 7454 | 265 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Phyllobacteriaceae | Phyllobacterium | Phyllobacterium meliloti | ||
| 14392958 | 14392958 | PRJNA1263632_P_NODE_6392_length_251_cov_0.865169_g6374_i0 | PRJNA1263632 | 6392 | 251 | 0.865169 | 2.17157419 | Herbaspirillum huttiense | 863372 | Bacteria | Bacteria | 453 | 5.34e-123 | NTclustered | gi|2735198065|gb|CP156025.1| | 863372 | g6374 | i0 | 99.203 | 4.68525896414343 | 251 | 2 | 100 | 0 | 1 | 251 | 1517017 | 1517267 | Herbaspirillum huttiense strain CLJ01 chromosome, complete genome | blastn | 1176 | 453 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Herbaspirillum | Herbaspirillum huttiense | ||
| 14392992 | 14392992 | PRJNA1263632_P_NODE_7852_length_244_cov_0.900585_g7834_i0 | PRJNA1263632 | 7852 | 244 | 0.900585 | 2.1974274 | Methylobacterium flocculans | 2984843 | Bacteria | Bacteria | 440 | 4.019999999999999e-119 | NTclustered | gi|2320848902|gb|CP107532.1| | 2984843 | g7834 | i0 | 99.18 | 53.8483606557377 | 244 | 2 | 100 | 0 | 1 | 244 | 1962435 | 1962192 | Methylobacterium flocculans strain FF17 chromosome, complete genome | blastn | 13139 | 440 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Methylobacteriaceae | Methylobacterium | Methylobacterium flocculans | ||
| 14393001 | 14393001 | PRJNA1263632_P_NODE_8172_length_242_cov_0.911243_g8154_i0 | PRJNA1263632 | 8172 | 242 | 0.911243 | 2.20520806 | Herbaspirillum | 963 | Bacteria | Bacteria | 70.5 | 4.41e-12 | NR | WP_121042775.1 | 963 | g8154 | i0 | 100 | 0.421487603305785 | 34 | 0 | 42.1 | 0 | 140 | 241 | 1 | 34 | WP_121042775.1 MULTISPECIES: glycosyltransferase family 2 protein [Herbaspirillum] | diamond | 102 | 70.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Herbaspirillum | |||
| 15666603 | 15666603 | PRJNA1263632_P_NODE_4193_length_304_cov_0.878788_g4175_i0 | PRJNA1263632 | 4193 | 304 | 0.878788 | 2.67151552 | Herbaspirillum huttiense | 863372 | Bacteria | Bacteria | 137 | 7.600000000000001e-28 | NTclustered | gi|2895395299|gb|CP178608.1| | 863372 | g4175 | i0 | 86.047 | 0.424342105263158 | 129 | 17 | 42 | 1 | 150 | 278 | 2769883 | 2769756 | Herbaspirillum huttiense strain HhutSZ1 chromosome, complete genome | blastn | 129 | 137 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Herbaspirillum | Herbaspirillum huttiense | ||
| 16356443 | 16356443 | PRJNA1263632_P_NODE_7093_length_247_cov_1.965517_g7075_i0 | PRJNA1263632 | 7093 | 247 | 1.965517 | 4.85482699 | Pseudomonas | 286 | Bacteria | Bacteria | 455 | 1.4600000000000002e-123 | NTclustered | gi|2620865316|gb|OR809848.1| | 306 | g7075 | i0 | 100 | 107.562753036437 | 246 | 0 | 99 | 0 | 2 | 247 | 373 | 128 | Pseudomonas sp. strain GFFN103 16S ribosomal RNA gene, partial sequence | blastn | 26568 | 455 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas sp. | ||
| 16940888 | 16940888 | PRJNA1263632_P_NODE_1934_length_435_cov_1.361878_g1916_i0 | PRJNA1263632 | 1934 | 435 | 1.361878 | 5.9241693 | Pseudomonadota bacterium | 1977087 | Bacteria | Bacteria | 211 | 2.2699999999999994e-67 | NR | MEL6702587.1 | 1977087 | g1916 | i0 | 69.7 | 0.979310344827586 | 142 | 43 | 97.9 | 0 | 433 | 8 | 18 | 159 | MEL6702587.1 50S ribosomal protein L2 [Pseudomonadota bacterium] | diamond | 426 | 211 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Pseudomonadota bacterium | ||||||
| 16940930 | 16940930 | PRJNA1263632_P_NODE_3294_length_339_cov_0.943609_g3276_i0 | PRJNA1263632 | 3294 | 339 | 0.943609 | 3.19883451 | Colwellia sp. M166 | 2583805 | Bacteria | Bacteria | 394 | 4.62e-105 | NTclustered | gi|2283119412|gb|CP040755.1| | 2583805 | g3276 | i0 | 94.208 | 708.035398230089 | 259 | 13 | 79 | 2 | 81 | 338 | 971985 | 971728 | Colwellia sp. M166 chromosome, complete genome | blastn | 240024 | 394 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Alteromonadales | Colwelliaceae | Colwellia | Colwellia sp. M166 | ||
| 16941060 | 16941060 | PRJNA1263632_P_NODE_7554_length_245_cov_0.895349_g7536_i0 | PRJNA1263632 | 7554 | 245 | 0.895349 | 2.19360505 | Herbaspirillum huttiense | 863372 | Bacteria | Bacteria | 448 | 2.41e-121 | NTclustered | gi|2735198065|gb|CP156025.1| | 863372 | g7536 | i0 | 99.592 | 66.2244897959184 | 245 | 1 | 100 | 0 | 1 | 245 | 2660099 | 2660343 | Herbaspirillum huttiense strain CLJ01 chromosome, complete genome | blastn | 16225 | 448 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Herbaspirillum | Herbaspirillum huttiense | ||
| 16941061 | 16941061 | PRJNA1263632_P_NODE_7594_length_245_cov_0.895349_g7576_i0 | PRJNA1263632 | 7594 | 245 | 0.895349 | 2.19360505 | Herbaspirillum huttiense | 863372 | Bacteria | Bacteria | 436 | 5.229999999999999e-118 | NTclustered | gi|2735198065|gb|CP156025.1| | 863372 | g7576 | i0 | 98.776 | 20.8040816326531 | 245 | 3 | 100 | 0 | 1 | 245 | 2480895 | 2480651 | Herbaspirillum huttiense strain CLJ01 chromosome, complete genome | blastn | 5097 | 436 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Herbaspirillum | Herbaspirillum huttiense | ||
| 16941063 | 16941063 | PRJNA1263632_P_NODE_7674_length_245_cov_0.895349_g7656_i0 | PRJNA1263632 | 7674 | 245 | 0.895349 | 2.19360505 | Herbaspirillum huttiense | 863372 | Bacteria | Bacteria | 363 | 8.989999999999999e-96 | NTclustered | gi|2895395299|gb|CP178608.1| | 863372 | g7656 | i0 | 100 | 4.46122448979592 | 196 | 0 | 80 | 0 | 1 | 196 | 2788157 | 2788352 | Herbaspirillum huttiense strain HhutSZ1 chromosome, complete genome | blastn | 1093 | 363 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Herbaspirillum | Herbaspirillum huttiense | ||
| 18905475 | 18905475 | PRJNA1263632_P_NODE_6495_length_251_cov_0.865169_g6477_i0 | PRJNA1263632 | 6495 | 251 | 0.865169 | 2.17157419 | Enterobacteriaceae | 543 | Bacteria | Bacteria | 449 | 6.899999999999999e-122 | NTclustered | gi|2650988455|gb|CP142548.1| | 562 | g6477 | i0 | 99.197 | 99.203187250996 | 249 | 2 | 99 | 0 | 1 | 249 | 813352 | 813600 | Escherichia coli strain ExPEC_A382 chromosome, complete genome | blastn | 24900 | 449 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 19489812 | 19489812 | PRJNA1263632_P_NODE_6956_length_248_cov_0.880000_g6938_i0 | PRJNA1263632 | 6956 | 248 | 0.88 | 2.1824 | Herbaspirillum huttiense | 863372 | Bacteria | Bacteria | 442 | 1.1399999999999995e-119 | NTclustered | gi|1597513135|gb|CP037993.1| | 863372 | g6938 | i0 | 98.79 | 9.73790322580645 | 248 | 3 | 100 | 0 | 1 | 248 | 665275 | 665028 | Herbaspirillum huttiense strain NFYY 53159 chromosome, complete genome | blastn | 2415 | 442 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Herbaspirillum | Herbaspirillum huttiense | ||
| 20765241 | 20765241 | PRJNA1263632_P_NODE_3377_length_336_cov_0.992395_g3359_i0 | PRJNA1263632 | 3377 | 336 | 0.992395 | 3.3344472 | Mesorhizobium sp. M1B.F.Ca.ET.045.04.1.1 | 2493673 | Bacteria | Bacteria | 54.7 | 0.009 | NTclustered | gi|1537891393|gb|CP034448.1| | 2493673 | g3359 | i0 | 100 | 0.169642857142857 | 29 | 0 | 9 | 0 | 294 | 322 | 5015717 | 5015689 | Mesorhizobium sp. M1B.F.Ca.ET.045.04.1.1 chromosome, complete genome | blastn | 57 | 54.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Phyllobacteriaceae | Mesorhizobium | Mesorhizobium sp. M1B.F.Ca.ET.045.04.1.1 | ||
| 20765304 | 20765304 | PRJNA1263632_P_NODE_5397_length_272_cov_1.386935_g5379_i0 | PRJNA1263632 | 5397 | 272 | 1.386935 | 3.7724632 | Sphingobium sp. RSMS | 520734 | Bacteria | Bacteria | 470 | 5.81e-128 | NTclustered | gi|2305901244|gb|CP053224.2| | 520734 | g5379 | i0 | 97.794 | 2 | 272 | 6 | 100 | 0 | 1 | 272 | 30823 | 30552 | Sphingobium sp. RSMS plasmid pRSMS1, complete sequence | blastn | 544 | 470 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingobium | Sphingobium sp. RSMS | ||
| 20765345 | 20765345 | PRJNA1263632_P_NODE_6677_length_250_cov_0.870056_g6659_i0 | PRJNA1263632 | 6677 | 250 | 0.870056 | 2.17514 | Gammaproteobacteria | 1236 | Bacteria | Bacteria | 90.9 | 3.67e-19 | NR | WP_116964742.1 | 2056695 | g6659 | i0 | 55.7 | 11.508 | 79 | 35 | 94.8 | 0 | 238 | 2 | 65 | 143 | WP_116964742.1 adenylosuccinate lyase [Fastidiosibacter lacustris] | diamond | 2877 | 91.7 | 0.991275899672846 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Thiotrichales | Fastidiosibacteraceae | Fastidiosibacter | Fastidiosibacter lacustris | ||
| 21455843 | 21455843 | PRJNA1263632_P_NODE_1557_length_479_cov_2.482759_g1539_i0 | PRJNA1263632 | 1557 | 479 | 2.482759 | 11.89241561 | Herbaspirillum | 963 | Bacteria | Bacteria | 841 | 0 | NTclustered | gi|2204876709|gb|CP049334.1| | 964 | g1539 | i0 | 98.33 | 267.062630480167 | 479 | 8 | 100 | 0 | 1 | 479 | 524601 | 524123 | Herbaspirillum seropedicae strain Z69 chromosome | blastn | 127923 | 841 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Herbaspirillum | Herbaspirillum seropedicae | ||
| 21455853 | 21455853 | PRJNA1263632_P_NODE_577_length_750_cov_4.212703_g560_i0 | PRJNA1263632 | 577 | 750 | 4.212703 | 31.5952725 | Herbaspirillum | 963 | Bacteria | Bacteria | 1380 | 0 | NTclustered | gi|1510310152|gb|CP024996.1| | 80842 | g560 | i0 | 99.867 | 441.585333333333 | 750 | 1 | 100 | 0 | 1 | 750 | 550239 | 550988 | Herbaspirillum rubrisubalbicans strain DSM 11543 chromosome, complete genome | blastn | 331189 | 1386 | 0.995670995670996 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Herbaspirillum | Herbaspirillum rubrisubalbicans | ||
| 22040473 | 22040473 | PRJNA1263632_P_NODE_7658_length_245_cov_0.895349_g7640_i0 | PRJNA1263632 | 7658 | 245 | 0.895349 | 2.19360505 | Phyllobacterium meliloti | 555317 | Bacteria | Bacteria | 278 | 3.35e-70 | NTclustered | gi|2165292098|gb|CP088273.1| | 555317 | g7640 | i0 | 87.5 | 1.96326530612245 | 240 | 30 | 98 | 0 | 6 | 245 | 3588440 | 3588679 | Phyllobacterium sp. T1293 chromosome, complete genome | blastn | 481 | 278 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Phyllobacteriaceae | Phyllobacterium | Phyllobacterium meliloti | ||
| 22730843 | 22730843 | PRJNA1263632_P_NODE_5518_length_269_cov_1.734694_g5500_i0 | PRJNA1263632 | 5518 | 269 | 1.734694 | 4.66632686 | Sphingomonas | 13687 | Bacteria | Bacteria | 497 | 2.63e-136 | NTclustered | gi|1253294515|gb|CP023705.1| | 152682 | g5500 | i0 | 100 | 218.368029739777 | 269 | 0 | 100 | 0 | 1 | 269 | 1201316 | 1201584 | Sphingomonas melonis strain ZJ26 chromosome, complete genome | blastn | 58741 | 497 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas melonis | ||
| 27358550 | 27358550 | PRJNA1263632_P_NODE_4603_length_292_cov_1.054795_g4585_i0 | PRJNA1263632 | 4603 | 292 | 1.054795 | 3.0800014 | Steroidobacteraceae bacterium | 2689616 | Bacteria | Bacteria | 99.8 | 5.54e-22 | NR | HXS88199.1 | 2689616 | g4585 | i0 | 56.4 | 3.70890410958904 | 78 | 32 | 78.1 | 1 | 8 | 235 | 171 | 248 | HXS88199.1 DUF4331 domain-containing protein [Steroidobacteraceae bacterium] | diamond | 1083 | 99.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Steroidobacterales | Steroidobacteraceae | Steroidobacteraceae bacterium | |||
| 27421778 | 27421778 | PRJNA1263632_P_NODE_4923_length_284_cov_1.459716_g4905_i0 | PRJNA1263632 | 4923 | 284 | 1.459716 | 4.14559344 | Pseudomonadota bacterium | 1977087 | Bacteria | Bacteria | 123 | 5.579999999999999e-34 | NR | MEL6702651.1 | 1977087 | g4905 | i0 | 69.7 | 0.940140845070423 | 89 | 26 | 93 | 1 | 20 | 283 | 7 | 95 | MEL6702651.1 30S ribosomal protein S11 [Pseudomonadota bacterium] | diamond | 267 | 123 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Pseudomonadota bacterium | ||||||
| 31559453 | 31559453 | PRJNA1263632_P_NODE_7336_length_246_cov_0.890173_g7318_i0 | PRJNA1263632 | 7336 | 246 | 0.890173 | 2.18982558 | Curvibacter sp. | 1888168 | Bacteria | Bacteria | 170 | 8.67e-53 | NR | RUP29150.1 | 1888168 | g7318 | i0 | 97.5 | 0.98780487804878 | 81 | 2 | 98.8 | 0 | 244 | 2 | 40 | 120 | RUP29150.1 MAG: ATPase [Curvibacter sp.] | diamond | 243 | 170 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Curvibacter | Curvibacter sp. | ||
| 31956581 | 31956581 | PRJNA1263632_P_NODE_7417_length_246_cov_0.890173_g7399_i0 | PRJNA1263632 | 7417 | 246 | 0.890173 | 2.18982558 | Bacteria | 2 | Bacteria | Bacteria | 45.1 | 0.00574 | NR | WP_267456116.1 | 1639133 | g7399 | i0 | 61.1 | 2.58536585365854 | 36 | 14 | 43.9 | 0 | 103 | 210 | 283 | 318 | WP_267456116.1 tyrosine-type recombinase/integrase [Citrobacter portucalensis] | diamond | 636 | 45.4 | 0.993392070484582 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Citrobacter | Citrobacter portucalensis | ||
| 32445311 | 32445311 | PRJNA1263632_P_NODE_5979_length_259_cov_1.591398_g5961_i0 | PRJNA1263632 | 5979 | 259 | 1.591398 | 4.12172082 | Phyllobacterium myrsinacearum | 28101 | Bacteria | Bacteria | 130 | 4.26e-33 | NR | WP_105734468.1 | 28101 | g5961 | i0 | 81.4 | 0.996138996138996 | 86 | 16 | 99.6 | 0 | 1 | 258 | 206 | 291 | WP_105734468.1 precorrin-3B C(17)-methyltransferase [Phyllobacterium myrsinacearum] | diamond | 258 | 130 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Phyllobacteriaceae | Phyllobacterium | Phyllobacterium myrsinacearum | ||
| 32558138 | 32558138 | PRJNA1263632_P_NODE_5719_length_265_cov_1.416667_g5701_i0 | PRJNA1263632 | 5719 | 265 | 1.416667 | 3.75416755 | root | 1 | Root_unresolved | Root_unresolved | 52.8 | 1.46e-5 | NR | WP_254229457.1 | 955 | g5701 | i0 | 31.8 | 6.15849056603774 | 88 | 58 | 97.4 | 2 | 260 | 3 | 2030 | 2117 | WP_254229457.1 ankyrin repeat domain-containing protein [Wolbachia pipientis] | diamond | 1632 | 53.1 | 0.994350282485876 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rickettsiales | Anaplasmataceae | Wolbachia | Wolbachia pipientis | ||
| 32571862 | 32571862 | PRJNA1263632_P_NODE_7039_length_248_cov_0.880000_g7021_i0 | PRJNA1263632 | 7039 | 248 | 0.88 | 2.1824 | Aquabacterium sp. | 1872578 | Bacteria | Bacteria | 144 | 5.23e-40 | NR | WP_290687756.1 | 1872578 | g7021 | i0 | 82.7 | 0.979838709677419 | 81 | 14 | 98 | 0 | 1 | 243 | 136 | 216 | WP_290687756.1 hypothetical protein [Aquabacterium sp.] | diamond | 243 | 144 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Aquabacterium | Aquabacterium sp. | |||
| 32904175 | 32904175 | PRJNA1263632_P_NODE_5280_length_275_cov_1.292079_g5262_i0 | PRJNA1263632 | 5280 | 275 | 1.292079 | 3.55321725 | Sphingomonadaceae | 41297 | Bacteria | Bacteria | 108 | 8.230000000000001e-26 | NR | WP_380889129.1 | 2249466 | g5262 | i0 | 64.8 | 2.98909090909091 | 91 | 29 | 99.3 | 1 | 3 | 275 | 149 | 236 | WP_380889129.1 MFS transporter [Sphingomonas tabacisoli] | diamond | 822 | 108 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas tabacisoli |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;