contig_metadata
8 rows where bioproject = "PRJNA1263632" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 363766 | 363766 | PRJNA1263632_P_NODE_7161_length_247_cov_0.885057_g7143_i0 | PRJNA1263632 | 7161 | 247 | 0.885057 | 2.18609079 | Clostridia bacterium | 2044939 | Bacteria | Bacteria | 81.6 | 1.72e-18 | NR | MEG1510266.1 | 2044939 | g7143 | i0 | 78.7 | 5.19838056680162 | 47 | 10 | 57.1 | 0 | 178 | 38 | 3 | 49 | MEG1510266.1 zinc-ribbon domain-containing protein [Clostridia bacterium] | diamond | 1284 | 81.6 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Clostridia bacterium | |||||
| 4882020 | 4882020 | PRJNA1263632_P_NODE_2404_length_391_cov_2.959119_g2386_i0 | PRJNA1263632 | 2404 | 391 | 2.959119 | 11.57015529 | Listeria | 1637 | Bacteria | Bacteria | 52.8 | 0.037 | NTclustered | gi|2611946659|gb|CP137276.1| | 1639 | g2386 | i0 | 96.875 | 8.82097186700767 | 32 | 0 | 8 | 1 | 81 | 112 | 2548517 | 2548487 | Listeria monocytogenes strain FV3 chromosome, complete genome | blastn | 3449 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Listeriaceae | Listeria | Listeria monocytogenes | ||
| 11257317 | 11257317 | PRJNA1263632_P_NODE_3189_length_343_cov_3.262963_g3171_i0 | PRJNA1263632 | 3189 | 343 | 3.262963 | 11.19196309 | root | 1 | Root_unresolved | Root_unresolved | 628 | 1.1799999999999997e-175 | NTclustered | gi|1796975023|gb|CP033086.1| | 1280 | g3171 | i0 | 99.708 | 98.8250728862974 | 343 | 1 | 100 | 0 | 1 | 343 | 2463318 | 2463660 | Staphylococcus aureus strain WH9628 chromosome | blastn | 33897 | 628 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 24006006 | 24006006 | PRJNA1263632_P_NODE_6799_length_249_cov_0.875000_g6781_i0 | PRJNA1263632 | 6799 | 249 | 0.875 | 2.17875 | Staphylococcus | 1279 | Bacteria | Bacteria | 455 | 1.47e-123 | NTclustered | gi|2669659999|gb|CP090011.1| | 1290 | g6781 | i0 | 99.598 | 97.8473895582329 | 249 | 1 | 100 | 0 | 1 | 249 | 60603 | 60355 | Staphylococcus hominis strain acrlg chromosome, complete genome | blastn | 24364 | 455 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus hominis | ||
| 27326807 | 27326807 | PRJNA1263632_P_NODE_1583_length_476_cov_1.751861_g1565_i0 | PRJNA1263632 | 1583 | 476 | 1.751861 | 8.33885836 | Clostridia bacterium | 2044939 | Bacteria | Bacteria | 191 | 5.4599999999999995e-56 | NR | MBP3800546.1 | 2044939 | g1565 | i0 | 62.8 | 0.913865546218487 | 145 | 54 | 91.4 | 0 | 436 | 2 | 125 | 269 | MBP3800546.1 50S ribosomal protein L3 [Clostridia bacterium] | diamond | 435 | 191 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Clostridia bacterium | |||||
| 27755369 | 27755369 | PRJNA1263632_P_NODE_4904_length_285_cov_1.070755_g4886_i0 | PRJNA1263632 | 4904 | 285 | 1.070755 | 3.05165175 | Bacteria | 2 | Bacteria | Bacteria | 53.5 | 9.16e-6 | NR | NLP48504.1 | 1898207 | g4886 | i0 | 44.7 | 2.55789473684211 | 85 | 39 | 89.5 | 4 | 284 | 30 | 267 | 343 | NLP48504.1 phosphonopyruvate decarboxylase [Clostridiales bacterium] | diamond | 729 | 53.5 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiales bacterium | ||||
| 31210844 | 31210844 | PRJNA1263632_P_NODE_7375_length_246_cov_0.890173_g7357_i0 | PRJNA1263632 | 7375 | 246 | 0.890173 | 2.18982558 | Clostridium botulinum | 1491 | Bacteria | Bacteria | 47.4 | 8.34e-4 | NR | NFE93591.1 | 1491 | g7357 | i0 | 36.3 | 1.95121951219512 | 80 | 48 | 95.1 | 2 | 5 | 238 | 40 | 118 | NFE93591.1 hypothetical protein [Clostridium botulinum] | diamond | 480 | 47.4 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium botulinum | ||
| 32666014 | 32666014 | PRJNA1263632_P_NODE_2260_length_404_cov_1.740181_g2242_i0 | PRJNA1263632 | 2260 | 404 | 1.740181 | 7.03033124 | Clostridia bacterium | 2044939 | Bacteria | Bacteria | 145 | 4.96e-39 | NR | MBP3800546.1 | 2044939 | g2242 | i0 | 59.8 | 0.905940594059406 | 122 | 49 | 90.6 | 0 | 3 | 368 | 282 | 403 | MBP3800546.1 50S ribosomal protein L3 [Clostridia bacterium] | diamond | 366 | 145 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Clostridia bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;