RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1263632", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 4 ✖

tax_phylum 1

  • Acidobacteriota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1263632 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26915674 26915674 PRJNA1263632_P_NODE_2082_length_421_cov_1.103448_g2064_i0 PRJNA1263632 2082 421 1.103448 4.64551608 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 117 1.5600000000000002e-27   NR HWB83519.1 2212468 g2064 i0 44.7 1.06888361045131 150 72 99 3 1 417 139 288 HWB83519.1 IPT/TIG domain-containing protein [Bryobacteraceae bacterium] diamond 450 117 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
30358734 30358734 PRJNA1263632_P_NODE_3252_length_341_cov_1.138060_g3234_i0 PRJNA1263632 3252 341 1.13806 3.8807846 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 181 5.1199999999999996e-54   NR MFN7987048.1 2651171 g3234 i0 75.2 0.994134897360704 113 26 99.4 1 339 1 161 271 MFN7987048.1 zinc metalloprotease [Thermoanaerobaculia bacterium] diamond 339 181 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
31197145 31197145 PRJNA1263632_P_NODE_5675_length_266_cov_1.580311_g5657_i0 PRJNA1263632 5675 266 1.580311 4.20362726 Bacteria 2 Bacteria Bacteria 48.1 6.06e-4   NR MFB3923964.1 2081523 g5657 i0 58.3 1.82706766917293 36 15 40.6 0 128 235 24 59 MFB3923964.1 protein kinase [Terriglobia bacterium] diamond 486 48.1 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia       Terriglobia bacterium
32589567 32589567 PRJNA1263632_P_NODE_4099_length_307_cov_1.316239_g4081_i0 PRJNA1263632 4099 307 1.316239 4.04085373 Bacteria 2 Bacteria Bacteria 155 1.91e-44   NR MBI1358074.1 1978231 g4081 i0 71.3 8.88273615635179 101 29 98.7 0 305 3 20 120 MBI1358074.1 hypothetical protein [Acidobacteriota bacterium] diamond 2727 156 0.993589743589744 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;