RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA1263632", tax_kingdom = "Metazoa" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 6 ✖

tax_kingdom 1

  • Metazoa · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA1263632 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19489694 19489694 PRJNA1263632_P_NODE_3236_length_341_cov_2.205224_g3218_i0 PRJNA1263632 3236 341 2.205224 7.51981384 Lottia gigantea 225164 Mollusca Mollusca 326 1.72e-84   NTclustered gi|676464446|ref|XM_009058677.1| 225164 g3218 i0 84.058 205.25219941349 345 47 100 8 1 341 800 460 Lottia gigantea hypothetical protein partial mRNA blastn 69991 326 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lottiidae Lottia Lottia gigantea
26820902 26820902 PRJNA1263632_P_NODE_7961_length_243_cov_0.905882_g7943_i0 PRJNA1263632 7961 243 0.905882 2.20129326 Candidula unifasciata 100452 Mollusca Mollusca 66.6 1.41e-10   NR CAG5127635.1 100452 g7943 i0 39.5 1.87654320987654 86 43 95.1 2 11 241 604 689 CAG5127635.1 unnamed protein product, partial [Candidula unifasciata] diamond 456 66.6 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Geomitridae Candidula Candidula unifasciata
27989973 27989973 PRJNA1263632_P_NODE_2985_length_354_cov_1.629893_g2967_i0 PRJNA1263632 2985 354 1.629893 5.76982122 Biomphalaria glabrata 6526 Mollusca Mollusca 120 1.05e-28   NR KAI8785142.1 6526 g2967 i0 51.7 6.90677966101695 116 56 98.3 0 5 352 1600 1715 KAI8785142.1 FK506-binding protein 5 [Biomphalaria glabrata] diamond 2445 120 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Planorbidae Biomphalaria Biomphalaria glabrata
28733982 28733982 PRJNA1263632_P_NODE_4387_length_298_cov_1.368889_g4369_i0 PRJNA1263632 4387 298 1.368889 4.07928922 Metazoa 33208 Mollusca Mollusca 129 3.99e-32   NR XP_035826131.1 6500 g4369 i0 64.6 29.6677852348993 99 35 99.7 0 298 2 83 181 XP_035826131.1 mesocentin [Aplysia californica] diamond 8841 129 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Aplysiida Aplysiidae Aplysia Aplysia californica
28891575 28891575 PRJNA1263632_P_NODE_7488_length_246_cov_0.890173_g7470_i0 PRJNA1263632 7488 246 0.890173 2.18982558 Neomphalida 3120499 Mollusca Mollusca 89.7 5.85e-19   NR KAK7496209.1 370345 g7470 i0 57.9 3.69512195121951 76 31 91.5 1 22 246 4 79 KAK7496209.1 hypothetical protein BaRGS_00012619 [Batillaria attramentaria] diamond 909 89.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Batillariidae Batillaria Batillaria attramentaria
31084973 31084973 PRJNA1263632_P_NODE_2595_length_378_cov_1.350820_g2577_i0 PRJNA1263632 2595 378 1.35082 5.1060996 Plakobranchus ocellatus 259542 Mollusca Mollusca 186 1.2099999999999997e-54   NR GFO33321.1 259542 g2577 i0 68.3 3.80952380952381 120 38 95.2 0 362 3 42 161 GFO33321.1 gelsolin, partial [Plakobranchus ocellatus] diamond 1440 186 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Plakobranchidae Plakobranchus Plakobranchus ocellatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;