RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

32 rows where bioproject = "PRJNA1263632" and tax_kingdom = "Fungi"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Fungi · 32 ✖

tax_clade 1

bioproject 1

  • PRJNA1263632 · 32 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1638517 1638517 PRJNA1263632_P_NODE_3782_length_319_cov_0.939024_g3764_i0 PRJNA1263632 3782 319 0.939024 2.99548656 Phycomyces blakesleeanus 4837 Fungi Fungi 200 1.0099999999999999e-46   NTclustered gi|1069947120|ref|XM_018433359.1| 763407 g3764 i0 83.721 65.6332288401254 215 31 67 2 97 311 108 318 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein partial mRNA blastn 20937 200 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
5467029 5467029 PRJNA1263632_P_NODE_3885_length_315_cov_0.950413_g3867_i0 PRJNA1263632 3885 315 0.950413 2.99380095 Phycomyces blakesleeanus 4837 Fungi Fungi 195 4.63e-45   NTclustered gi|1069938230|ref|XM_018429293.1| 763407 g3867 i0 80.228 34.0666666666667 263 48 83 4 7 267 3331 3071 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein mRNA blastn 10731 195 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
6741435 6741435 PRJNA1263632_P_NODE_2966_length_355_cov_1.581560_g2948_i0 PRJNA1263632 2966 355 1.58156 5.614538 Saccharomyces paradoxus 27291 Fungi Fungi 191 6.82e-44   NTclustered gi|2087953814|gb|CP081976.1| 27291 g2948 i0 81.048 50.0676056338028 248 39 69 8 1 244 58341 58098 Mutant Saccharomyces paradoxus strain 337 chromosome X genomic sequence blastn 17774 191 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Saccharomyces Saccharomyces paradoxus
8017187 8017187 PRJNA1263632_P_NODE_7927_length_243_cov_1.329412_g7909_i0 PRJNA1263632 7927 243 1.329412 3.23047116 Eukaryota 2759 Fungi Fungi 91.3 2.38e-21   NR XP_500817.2 4952 g7909 i0 75.4 33.7777777777778 57 14 70.4 0 242 72 85 141 XP_500817.2 40S ribosomal protein uS9 [Yarrowia lipolytica] diamond 8208 91.3 1 Eukaryota Opisthokonta Fungi Ascomycota Dipodascomycetes Dipodascales   Yarrowia Yarrowia lipolytica
9291758 9291758 PRJNA1263632_P_NODE_1188_length_550_cov_2.350105_g1170_i0 PRJNA1263632 1188 550 2.350105 12.9255775 uncultured fungus 175245 Fungi Fungi 475 2.7099999999999994e-129   NTclustered gi|2159202804|emb|OU941232.1| 175245 g1170 i0 82.554 44.44 556 82 99 15 1 549 762 1309 uncultured fungus genomic DNA sequence contains 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2, 28S rRNA gene, isolate consensus02526 blastn 24442 475 1 Eukaryota Opisthokonta Fungi           uncultured fungus
9291914 9291914 PRJNA1263632_P_NODE_6128_length_255_cov_4.043956_g6110_i0 PRJNA1263632 6128 255 4.043956 10.3120878 Candida jiufengensis 497108 Fungi Fungi 213 1e-50   NTclustered gi|2325096801|ref|XM_051763683.1| 497108 g6110 i0 82.917 80.8039215686274 240 38 93 3 6 243 143 381 Candida jiufengensis translation elongation factor EF-1 alpha (KGF54_003128), partial mRNA blastn 20605 213 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Candida Candida jiufengensis
10567728 10567728 PRJNA1263632_P_NODE_1449_length_496_cov_1.366430_g1431_i0 PRJNA1263632 1449 496 1.36643 6.7774928 Cryptococcus depauperatus 5208 Fungi Fungi 60.2 2.89e-4   NTclustered gi|2753010347|ref|XM_066215550.1| 1295531 g1431 i0 100 0.0645161290322581 32 0 6 0 97 128 179 148 Cryptococcus depauperatus CBS 7841 uncharacterized protein (L203_106192), partial mRNA blastn 32 60.2 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cryptococcaceae Cryptococcus Cryptococcus depauperatus
11842296 11842296 PRJNA1263632_P_NODE_1870_length_442_cov_1.791328_g1852_i0 PRJNA1263632 1870 442 1.791328 7.91766976 uncultured fungus 175245 Fungi Fungi 710 0   NTclustered gi|583834395|gb|KF567961.1| 175245 g1852 i0 95.74 133.79185520362 446 10 99 7 2 442 108 549 Uncultured soil fungus clone NCD_LSU_otu2991 28S ribosomal RNA gene, partial sequence blastn 59136 710 1 Eukaryota Opisthokonta Fungi           uncultured fungus
18215544 18215544 PRJNA1263632_P_NODE_8055_length_243_cov_0.905882_g8037_i0 PRJNA1263632 8055 243 0.905882 2.20129326 Ambispora gerdemannii 144530 Fungi Fungi 99.4 7.61e-24   NR CAG8440672.1 144530 g8037 i0 69.2 4.98765432098765 65 20 80.2 0 197 3 30 94 CAG8440672.1 13590_t:CDS:2 [Ambispora gerdemannii] diamond 1212 99.4 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Archaeosporales Ambisporaceae Ambispora Ambispora gerdemannii
20180091 20180091 PRJNA1263632_P_NODE_4196_length_303_cov_2.873913_g4178_i0 PRJNA1263632 4196 303 2.873913 8.70795639 Opisthokonta 33154 Fungi Fungi 58.4 6.07e-4   NTclustered gi|2491074381|gb|CP122417.1| 5207 g4178 i0 90.698 1.5016501650165 43 4 14 0 100 142 737519 737561 Cryptococcus neoformans isolate Bt63 blastn 455 58.4 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cryptococcaceae Cryptococcus Cryptococcus neoformans
23315969 23315969 PRJNA1263632_P_NODE_8059_length_243_cov_0.905882_g8041_i0 PRJNA1263632 8059 243 0.905882 2.20129326 Cladosporium halotolerans 1052096 Fungi Fungi 78.7 3.61e-10   NTclustered gi|2837739333|ref|XM_069371983.1| 1052096 g8041 i0 94.118 15.8847736625514 51 3 21 0 193 243 379 429 Cladosporium halotolerans Ras-related protein Rab-6B (Rab6b), mRNA blastn 3860 78.7 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium halotolerans
24590087 24590087 PRJNA1263632_P_NODE_7200_length_247_cov_0.885057_g7182_i0 PRJNA1263632 7200 247 0.885057 2.18609079 Olpidium brassicae 70189 Fungi Fungi 152 2.1399999999999998e-32   NTclustered gi|358030887|dbj|AB609177.1| 70189 g7182 i0 79.73 63.2591093117409 222 35 89 6 11 230 1235 1448 Olpidium brassicae EF2 mRNA for translation elongation factor 2, partial cds, specimen_voucher: UBC:UBC F19784, clone: 2 blastn 15625 152 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium brassicae
25280103 25280103 PRJNA1263632_P_NODE_2980_length_354_cov_3.572954_g2962_i0 PRJNA1263632 2980 354 3.572954 12.64825716 Debaryomycetaceae 766764 Fungi Fungi 235 3.1e-57   NTclustered gi|68484887|ref|XM_708572.1| 237561 g2962 i0 81.754 79.593220338983 285 48 80 4 1 283 352 70 Candida albicans SC5314 Hht21p (HHT21), partial mRNA blastn 28176 237 0.991561181434599 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Candida Candida albicans
26933539 26933539 PRJNA1263632_P_NODE_3302_length_338_cov_2.086792_g3284_i0 PRJNA1263632 3302 338 2.086792 7.05335696 Gigaspora 4873 Fungi Fungi 47.4 0.00242   NR CAG8817244.1 4874 g3284 i0 24.4 3.16863905325444 90 68 79.9 0 271 2 284 373 CAG8817244.1 206_t:CDS:2 [Gigaspora margarita] diamond 1071 47.8 0.99163179916318 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Gigasporaceae Gigaspora Gigaspora margarita
27263648 27263648 PRJNA1263632_P_NODE_8383_length_241_cov_0.916667_g8365_i0 PRJNA1263632 8383 241 0.916667 2.20916747 Phycomyces blakesleeanus NRRL 1555(-) 763407 Fungi Fungi 43.9 0.0146   NR XP_018288758.1 763407 g8365 i0 35.5 0.771784232365145 62 34 69.7 1 213 46 920 981 XP_018288758.1 hypothetical protein PHYBLDRAFT_134942 [Phycomyces blakesleeanus NRRL 1555(-)] diamond 186 43.9 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
27439656 27439656 PRJNA1263632_P_NODE_3663_length_323_cov_3.060000_g3645_i0 PRJNA1263632 3663 323 3.06 9.8838 Serinales 2916678 Fungi Fungi 107 1.38e-25   NR XBA49654.1 498019 g3645 i0 60.4 5.72136222910217 91 29 81.7 2 270 7 72 158 XBA49654.1 40S ribosomal protein S2 [Candidozyma auris] diamond 1848 107 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Metschnikowiaceae Candidozyma Candidozyma auris
28400346 28400346 PRJNA1263632_P_NODE_8286_length_241_cov_3.130952_g8268_i0 PRJNA1263632 8286 241 3.130952 7.54559432 Rozella allomycis CSF55 988480 Fungi Fungi 82 1.01e-16   NR EPZ34692.1 988480 g8268 i0 66.2 3.90871369294606 65 21 79.7 1 219 28 190 254 EPZ34692.1 Nucleic acid-binding domain-containing protein [Rozella allomycis CSF55] diamond 942 82 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
28512862 28512862 PRJNA1263632_P_NODE_6007_length_259_cov_1.064516_g5989_i0 PRJNA1263632 6007 259 1.064516 2.75709644 Acidomyces 245561 Fungi Fungi 72 2.24e-12   NR KXL44453.1 245562 g5989 i0 50 1.62162162162162 70 34 81.1 1 212 3 2237 2305 KXL44453.1 MAG: hypothetical protein FE78DRAFT_32632 [Acidomyces sp. 'richmondensis'] diamond 420 72 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Mycosphaerellales Teratosphaeriaceae Acidomyces Acidomyces sp. 'richmondensis'
29158306 29158306 PRJNA1263632_P_NODE_8549_length_234_cov_14.714286_g8531_i0 PRJNA1263632 8549 234 14.714286 34.43142924 Hebeloma cylindrosporum 76867 Fungi Fungi 42 0.0471   NR KIM44929.1 76867 g8531 i0 32.8 0.782051282051282 61 39 75.6 1 226 50 80 140 KIM44929.1 hypothetical protein M413DRAFT_366735 [Hebeloma cylindrosporum] diamond 183 42 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Hymenogastraceae Hebeloma Hebeloma cylindrosporum
29410598 29410598 PRJNA1263632_P_NODE_6189_length_254_cov_2.651934_g6171_i0 PRJNA1263632 6189 254 2.651934 6.73591236 [Candida] railenensis 45579 Fungi Fungi 83.2 2.45e-16   NR CAH2353102.1 45579 g6171 i0 49.4 3.70866141732283 77 37 88.6 1 1 225 221 297 CAH2353102.1 phenylalanine--tRNA ligase beta subunit [[Candida] railenensis] diamond 942 83.2 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Kurtzmaniella [Candida] railenensis
29694539 29694539 PRJNA1263632_P_NODE_4510_length_294_cov_1.904977_g4492_i0 PRJNA1263632 4510 294 1.904977 5.60063238 Linnemannia zychae 979765 Fungi Fungi 50.1 1.72e-4   NR KAF9922779.1 979765 g4492 i0 36.2 0.704081632653061 69 44 70.4 0 227 21 284 352 KAF9922779.1 40S ribosomal protein [Linnemannia zychae] diamond 207 50.1 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Linnemannia Linnemannia zychae
30674103 30674103 PRJNA1263632_P_NODE_8313_length_241_cov_1.446429_g8295_i0 PRJNA1263632 8313 241 1.446429 3.48589389 Blyttiomyces sp. JEL 2750429 Fungi Fungi 81.3 5.37e-17   NR KAJ3332731.1 2724214 g8295 i0 53.4 0.908713692946058 73 33 89.6 1 22 237 65 137 KAJ3332731.1 hypothetical protein HDU76_013278 [Blyttiomyces sp. JEL0837] diamond 219 81.3 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes     Blyttiomyces Blyttiomyces sp. JEL0837
30849973 30849973 PRJNA1263632_P_NODE_8414_length_241_cov_0.916667_g8396_i0 PRJNA1263632 8414 241 0.916667 2.20916747 Agaricomycetes 155619 Fungi Fungi 87 1.77e-19   NR KAH8120433.1 127956 g8396 i0 50.6 5.00414937759336 81 39 99.6 1 241 2 72 152 KAH8120433.1 single hybrid motif-containing protein [Phellopilus nigrolimitatus] diamond 1206 87 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Hymenochaetales Hymenochaetaceae Phellopilus Phellopilus nigrolimitatus
31210842 31210842 PRJNA1263632_P_NODE_5975_length_259_cov_1.655914_g5957_i0 PRJNA1263632 5975 259 1.655914 4.28881726 Flagelloscypha sp. PMI_526 1485228 Fungi Fungi 64.3 8.3e-10   NR KAH8827993.1 1485228 g5957 i0 40.8 0.88030888030888 76 41 88 1 229 2 207 278 KAH8827993.1 autophagy-related protein 27 [Flagelloscypha sp. PMI_526] diamond 228 64.3 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Tricholomataceae Flagelloscypha Flagelloscypha sp. PMI_526
31418893 31418893 PRJNA1263632_P_NODE_1676_length_464_cov_0.787724_g1658_i0 PRJNA1263632 1676 464 0.787724 3.65503936 Eurotiomycetes 147545 Fungi Fungi 84.7 8.87e-16   NR XP_069260166.1 28565 g1658 i0 35.4 2.71551724137931 147 77 89.2 3 48 461 377 514 XP_069260166.1 uncharacterized protein VTN31DRAFT_4653 [Thermomyces dupontii] diamond 1260 84.7 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Trichocomaceae Thermomyces Thermomyces dupontii
31450696 31450696 PRJNA1263632_P_NODE_6236_length_253_cov_2.500000_g6218_i0 PRJNA1263632 6236 253 2.5 6.325 Chytridiomycetes 451435 Fungi Fungi 97.8 9.47e-24   NR KAJ3233149.1 4814 g6218 i0 59.8 8.76284584980237 82 33 97.2 0 247 2 33 114 KAJ3233149.1 60S ribosomal protein L26B [Chytriomyces hyalinus] diamond 2217 97.8 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Chytriomyces Chytriomyces hyalinus
31875404 31875404 PRJNA1263632_P_NODE_2657_length_375_cov_1.013245_g2639_i0 PRJNA1263632 2657 375 1.013245 3.79966875 Obelidium mucronatum 110081 Fungi Fungi 96.3 4.95e-22   NR KAI9321959.1 110081 g2639 i0 38.1 0.944 118 73 94.4 0 3 356 12 129 KAI9321959.1 hypothetical protein BDR26DRAFT_904505 [Obelidium mucronatum] diamond 354 96.3 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Obelidium Obelidium mucronatum
32033798 32033798 PRJNA1263632_P_NODE_6698_length_250_cov_0.870056_g6680_i0 PRJNA1263632 6698 250 0.870056 2.17514 Zopfochytrium polystomum 2211651 Fungi Fungi 99.4 2.32e-24   NR KAI9342478.1 2211651 g6680 i0 66.2 3.132 65 22 78 0 195 1 7 71 KAI9342478.1 40S ribosomal protein S19-A [Zopfochytrium polystomum] diamond 783 99.4 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Zopfochytrium Zopfochytrium polystomum
32287223 32287223 PRJNA1263632_P_NODE_7359_length_246_cov_0.890173_g7341_i0 PRJNA1263632 7359 246 0.890173 2.18982558 Chytriomyces cf. hyalinus JEL632 1907226 Fungi Fungi 43.9 0.0155   NR KAI8825447.1 1907226 g7341 i0 44.7 0.463414634146341 38 21 46.3 0 228 115 62 99 KAI8825447.1 hypothetical protein BJ741DRAFT_654605 [Chytriomyces cf. hyalinus JEL632] diamond 114 43.9 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Chytriomyces Chytriomyces cf. hyalinus JEL632
32760532 32760532 PRJNA1263632_P_NODE_3400_length_335_cov_1.259542_g3382_i0 PRJNA1263632 3400 335 1.259542 4.2194657 Candida tropicalis MYA-34 5482 Fungi Fungi 48.9 7.48e-4   NR XP_002548829.1 294747 g3382 i0 29.5 1.09253731343284 122 71 95.8 2 321 1 725 846 XP_002548829.1 predicted protein [Candida tropicalis MYA-3404] diamond 366 48.9 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Candida Candida tropicalis
32809764 32809764 PRJNA1263632_P_NODE_2900_length_359_cov_1.604895_g2882_i0 PRJNA1263632 2900 359 1.604895 5.76157305 Fungi 4751 Fungi Fungi 85.5 7.51e-18   NR KAG4028786.1 38448 g2882 i0 41 55.520891364902504 122 69 99.4 3 359 3 47 168 KAG4028786.1 hypothetical protein MFRU_019g00740 [Monilinia fructicola] diamond 19932 86.3 0.990730011587486 Eukaryota Opisthokonta Fungi Ascomycota Leotiomycetes Helotiales Sclerotiniaceae Monilinia Monilinia fructicola
32809765 32809765 PRJNA1263632_P_NODE_5760_length_264_cov_1.518325_g5742_i0 PRJNA1263632 5760 264 1.518325 4.008378 Eukaryota 2759 Fungi Fungi 97.8 2.09e-21   NR P48720.1 4808 g5742 i0 56.5 2.93181818181818 85 36 96.6 1 1 255 548 631 P48720.1 RecName: Full=Heat shock 70 kDa protein [Blastocladiella emersonii] diamond 774 98.2 0.995926680244399 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;