contig_metadata
9 rows where bioproject = "PRJNA1263632", tax_clade = "Sar" and tax_phylum = "Oomycota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5467041 | 5467041 | PRJNA1263632_P_NODE_4205_length_303_cov_1.686957_g4187_i0 | PRJNA1263632 | 4205 | 303 | 1.686957 | 5.11147971 | Oomycota | 4762 | SAR_Eukaryotes | SAR_Eukaryotes | 171 | 1.09e-49 | NR | OQS04692.1 | 74557 | g4187 | i0 | 84.2 | 24 | 101 | 16 | 100 | 0 | 303 | 1 | 10 | 110 | OQS04692.1 aspartyl/Asparaginyl beta-hydroxylase [Thraustotheca clavata] | diamond | 7272 | 172 | 0.994186046511628 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Achlyaceae | Thraustotheca | Thraustotheca clavata | ||
| 8017038 | 8017038 | PRJNA1263632_P_NODE_2547_length_381_cov_1.483766_g2529_i0 | PRJNA1263632 | 2547 | 381 | 1.483766 | 5.65314846 | Aphanomyces astaci | 112090 | SAR_Eukaryotes | SAR_Eukaryotes | 259 | 1.99e-64 | NTclustered | gi|698807229|ref|XM_009838342.1| | 112090 | g2529 | i0 | 80.112 | 82.6692913385827 | 357 | 63 | 92 | 4 | 31 | 380 | 441 | 86 | Aphanomyces astaci polyubiquitin mRNA | blastn | 31497 | 259 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Verrucalvaceae | Aphanomyces | Aphanomyces astaci | ||
| 10567713 | 10567713 | PRJNA1263632_P_NODE_1049_length_583_cov_1.327451_g1031_i0 | PRJNA1263632 | 1049 | 583 | 1.327451 | 7.73903933 | Peronosporomycetes | 3418804 | SAR_Eukaryotes | SAR_Eukaryotes | 296 | 1.82e-99 | NR | KAG1694345.1 | 4784 | g1031 | i0 | 71.4 | 6.65351629502573 | 185 | 53 | 95.2 | 0 | 29 | 583 | 1 | 185 | KAG1694345.1 40S ribosomal protein S4 [Phytophthora capsici] | diamond | 3879 | 296 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora capsici | ||
| 15666642 | 15666642 | PRJNA1263632_P_NODE_5213_length_277_cov_1.122549_g5195_i0 | PRJNA1263632 | 5213 | 277 | 1.122549 | 3.10946073 | Peronosporomycetes | 3418804 | SAR_Eukaryotes | SAR_Eukaryotes | 149 | 1.1399999999999996e-43 | NR | CCI48174.1 | 65357 | g5195 | i0 | 77.2 | 11.7942238267148 | 92 | 21 | 99.6 | 0 | 2 | 277 | 11 | 102 | CCI48174.1 unnamed protein product [Albugo candida] | diamond | 3267 | 149 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Albuginales | Albuginaceae | Albugo | Albugo candida | ||
| 20765350 | 20765350 | PRJNA1263632_P_NODE_6857_length_249_cov_0.875000_g6839_i0 | PRJNA1263632 | 6857 | 249 | 0.875 | 2.17875 | Thraustotheca clavata | 74557 | SAR_Eukaryotes | SAR_Eukaryotes | 143 | 1.28e-39 | NR | OQR97649.1 | 74557 | g6839 | i0 | 85.4 | 13.8313253012048 | 82 | 12 | 98.8 | 0 | 2 | 247 | 86 | 167 | OQR97649.1 malate dehydrogenase, mitochondrial precursor [Thraustotheca clavata] | diamond | 3444 | 143 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Achlyaceae | Thraustotheca | Thraustotheca clavata | ||
| 28102284 | 28102284 | PRJNA1263632_P_NODE_5605_length_268_cov_1.184615_g5587_i0 | PRJNA1263632 | 5605 | 268 | 1.184615 | 3.1747682 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 92.4 | 1.69e-19 | NR | AOW41676.1 | 4803 | g5587 | i0 | 49.4 | 1.90298507462687 | 89 | 44 | 99.6 | 1 | 268 | 2 | 359 | 446 | AOW41676.1 glycoside hydrolase 20 [Lagenidium giganteum] | diamond | 510 | 92.4 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Lagenidium | Lagenidium giganteum | ||
| 28937195 | 28937195 | PRJNA1263632_P_NODE_6808_length_249_cov_0.875000_g6790_i0 | PRJNA1263632 | 6808 | 249 | 0.875 | 2.17875 | Phytophthora ramorum | 164328 | SAR_Eukaryotes | SAR_Eukaryotes | 73.9 | 4.28e-13 | NR | KAL4144622.1 | 164328 | g6790 | i0 | 45.1 | 1.72289156626506 | 71 | 36 | 85.5 | 1 | 249 | 37 | 987 | 1054 | KAL4144622.1 hypothetical protein PRNP1_013751 [Phytophthora ramorum] | diamond | 429 | 73.9 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora ramorum | ||
| 29631427 | 29631427 | PRJNA1263632_P_NODE_3790_length_318_cov_2.820408_g3772_i0 | PRJNA1263632 | 3790 | 318 | 2.820408 | 8.96889744 | Thraustotheca clavata | 74557 | SAR_Eukaryotes | SAR_Eukaryotes | 176 | 1.33e-51 | NR | OQR91137.1 | 74557 | g3772 | i0 | 79 | 2.97169811320755 | 105 | 22 | 99.1 | 0 | 317 | 3 | 2 | 106 | OQR91137.1 60S ribosomal protein L3 [Thraustotheca clavata] | diamond | 945 | 176 | 1 | Eukaryota | Sar | Oomycota | Saprolegniomycetes | Saprolegniales | Achlyaceae | Thraustotheca | Thraustotheca clavata | ||
| 29852843 | 29852843 | PRJNA1263632_P_NODE_3691_length_322_cov_1.855422_g3673_i0 | PRJNA1263632 | 3691 | 322 | 1.855422 | 5.97445884 | Albugo candida | 65357 | SAR_Eukaryotes | SAR_Eukaryotes | 45.8 | 0.00748 | NR | CCI42232.1 | 65357 | g3673 | i0 | 37.3 | 0.959627329192547 | 59 | 36 | 55 | 1 | 36 | 212 | 95 | 152 | CCI42232.1 unnamed protein product [Albugo candida] | diamond | 309 | 45.8 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Albuginales | Albuginaceae | Albugo | Albugo candida |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;