RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA1263632" and tax_clade = "Metamonada"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Metamonada · 7 ✖

bioproject 1

  • PRJNA1263632 · 7 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27800594 27800594 PRJNA1263632_P_NODE_5224_length_276_cov_2.270936_g5206_i0 PRJNA1263632 5224 276 2.270936 6.26778336 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 72.4 3.11e-13   NR KAJ3452455.1 1746091 g5206 i0 38.8 4.58695652173913 85 51 92.4 1 275 21 1 84 KAJ3452455.1 40S ribosomal protein S10 [Anaeramoeba flamelloides] diamond 1266 72.4 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
28179061 28179061 PRJNA1263632_P_NODE_7126_length_247_cov_1.229885_g7108_i0 PRJNA1263632 7126 247 1.229885 3.03781595 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 57.4 2.66e-7   NR KAJ3433882.1 1746091 g7108 i0 44.8 1.38461538461538 58 30 69.2 2 193 23 65 121 KAJ3433882.1 ran-binding protein 9/10 [Anaeramoeba flamelloides] diamond 342 57.4 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
29379167 29379167 PRJNA1263632_P_NODE_4489_length_295_cov_1.387387_g4471_i0 PRJNA1263632 4489 295 1.387387 4.09279165 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 102 5.72e-23   NR KAJ5067249.1 1746090 g4471 i0 57.6 0.864406779661017 85 35 85.4 1 294 43 319 403 KAJ5067249.1 coronin [Anaeramoeba ignava] diamond 255 102 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava
29568511 29568511 PRJNA1263632_P_NODE_6770_length_249_cov_0.875000_g6752_i0 PRJNA1263632 6770 249 0.875 2.17875 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 107 9.46e-25   NR XP_067726321.1 2049356 g6752 i0 59.3 4.75903614457831 81 33 97.6 0 247 5 5 85 XP_067726321.1 putative stress-induced-phosphoprotein 1 [Monocercomonoides exilis] diamond 1185 107 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
31021801 31021801 PRJNA1263632_P_NODE_6875_length_249_cov_0.875000_g6857_i0 PRJNA1263632 6875 249 0.875 2.17875 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 47 0.00128   NR KAJ4459179.1 342808 g6857 i0 80 0.481927710843373 20 4 24.1 0 248 189 784 803 KAJ4459179.1 putative Ctype lysozyme/alpha-lactalbumin superfamily protein [Paratrimastix pyriformis] diamond 120 47 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
31875408 31875408 PRJNA1263632_P_NODE_8357_length_241_cov_0.916667_g8339_i0 PRJNA1263632 8357 241 0.916667 2.20916747 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 51.2 3.8e-5   NR KAJ3438723.1 1746091 g8339 i0 30.9 0.846473029045643 68 47 84.6 0 238 35 169 236 KAJ3438723.1 ras gtpase-related [Anaeramoeba flamelloides] diamond 204 51.2 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
32571860 32571860 PRJNA1263632_P_NODE_1739_length_457_cov_1.229167_g1721_i0 PRJNA1263632 1739 457 1.229167 5.61729319 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 100 2.2e-22   NR XP_001581855.1 412133 g1721 i0 45.5 0.87964989059081 134 65 87.3 2 399 1 121 247 XP_001581855.1 hypothetical protein TVAGG3_0565230 [Trichomonas vaginalis G3] diamond 402 100 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;