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contig_metadata

26 rows where bioproject = "PRJNA1263632" and tax_clade = "Amoebozoa"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 26 ✖

bioproject 1

  • PRJNA1263632 · 26 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
363731 363731 PRJNA1263632_P_NODE_6061_length_257_cov_1.728261_g6043_i0 PRJNA1263632 6061 257 1.728261 4.44163077 Dictyostelium purpureum 5786 Evosea other_Eukaryota 244 3.59e-60   NTclustered gi|330792727|ref|XM_003284391.1| 5786 g6043 i0 85.294 92.295719844358 238 34 93 1 5 242 307 71 Dictyostelium purpureum elongation factor 1 alpha (DICPUDRAFT_52946), mRNA blastn 23720 244 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
2914513 2914513 PRJNA1263632_P_NODE_8063_length_243_cov_0.905882_g8045_i0 PRJNA1263632 8063 243 0.905882 2.20129326 Eumycetozoa 142796 Evosea other_Eukaryota 105 1.52e-25   NR XP_629513.1 352472 g8045 i0 65.3 2.65432098765432 72 25 88.9 0 243 28 202 273 XP_629513.1 cytochrome c1 [Dictyostelium discoideum AX4] diamond 645 105 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
5466964 5466964 PRJNA1263632_P_NODE_1905_length_438_cov_7.073973_g1887_i0 PRJNA1263632 1905 438 7.073973 30.98400174 Ripella sp. 805 1217113 Discosea other_Eukaryota 695 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g1887 i0 95.434 101.719178082192 438 16 100 2 1 438 998 565 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 44553 695 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
9291970 9291970 PRJNA1263632_P_NODE_8408_length_241_cov_0.916667_g8390_i0 PRJNA1263632 8408 241 0.916667 2.20916747 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 148 1.25e-40   NR XP_004357511.1 261658 g8390 i0 91.3 290.788381742739 80 7 99.6 0 240 1 213 292 XP_004357511.1 26S proteasome ATPase 1 subunit [Cavenderia fasciculata] diamond 70080 149 0.993288590604027 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
14392786 14392786 PRJNA1263632_P_NODE_1272_length_531_cov_1.351528_g1254_i0 PRJNA1263632 1272 531 1.351528 7.17661368 Vannella persistens 303303 Discosea other_Eukaryota 948 0   NTclustered gi|165968548|gb|EU377588.1| 303303 g1254 i0 98.87 90.6139359698682 531 6 100 0 1 531 559 29 Vannella persistens strain CRIB69 18S ribosomal RNA gene, partial sequence blastn 48116 948 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella persistens
15666627 15666627 PRJNA1263632_P_NODE_4873_length_285_cov_1.872642_g4855_i0 PRJNA1263632 4873 285 1.872642 5.3370297 Thecamoeba similis 242545 Discosea other_Eukaryota 322 1.82e-83   NTclustered gi|33946350|gb|AY294154.1| 242545 g4855 i0 88.39 83.8771929824561 267 31 94 0 19 285 25 291 Thecamoeba similis actin mRNA, complete cds blastn 23905 322 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Thecamoeba Thecamoeba similis
15666678 15666678 PRJNA1263632_P_NODE_6473_length_251_cov_0.865169_g6455_i0 PRJNA1263632 6473 251 0.865169 2.17157419 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 130 4.88e-35   NR XP_004336240.1 1257118 g6455 i0 73.5 4.91235059760956 83 22 99.2 0 3 251 93 175 XP_004336240.1 protein serine/threonine kinase [Acanthamoeba castellanii str. Neff] diamond 1233 130 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
18215353 18215353 PRJNA1263632_P_NODE_1395_length_505_cov_1.722222_g1377_i0 PRJNA1263632 1395 505 1.722222 8.6972211 Ripella sp. 805 1217113 Discosea other_Eukaryota 776 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g1377 i0 94.499 100.889108910891 509 19 100 9 1 505 507 4 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 50949 776 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
18215457 18215457 PRJNA1263632_P_NODE_4895_length_285_cov_1.165094_g4877_i0 PRJNA1263632 4895 285 1.165094 3.3205179 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 118 1.49e-28   NR PRP83857.1 1890364 g4877 i0 57.5 1.89473684210526 87 37 91.6 0 284 24 133 219 PRP83857.1 hypothetical protein PROFUN_08888 [Planoprotostelium fungivorum] diamond 540 118 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
18215565 18215565 PRJNA1263632_P_NODE_995_length_595_cov_2.867816_g977_i0 PRJNA1263632 995 595 2.867816 17.0635052 Ripella platypodia 2047821 Discosea other_Eukaryota 935 0   NTclustered gi|1269228354|gb|MF683479.1| 2047821 g977 i0 95.294 100.536134453782 595 18 99 6 3 595 1645 1059 Ripella platypodia clone 23.4.28 18S ribosomal RNA gene, partial sequence blastn 59819 935 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella platypodia
23315981 23315981 PRJNA1263632_P_NODE_8379_length_241_cov_0.916667_g8361_i0 PRJNA1263632 8379 241 0.916667 2.20916747 Heterostelium album 2086695 Evosea other_Eukaryota 285 1.96e-72   NTclustered gi|1160574132|ref|XM_020577244.1| 670386 g8361 i0 87.967 99.5643153526971 241 29 100 0 1 241 1003 763 Polysphondylium pallidum PN500 actin (act10), partial mRNA blastn 23995 285 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
24589987 24589987 PRJNA1263632_P_NODE_3300_length_338_cov_2.301887_g3282_i0 PRJNA1263632 3300 338 2.301887 7.78037806 Paravannella minima 1443144 Discosea other_Eukaryota 412 1.2699999999999999e-110   NTclustered gi|571331049|gb|KF895376.1| 1443144 g3282 i0 88.724 99.0532544378698 337 38 99 0 2 338 49 385 Paravannella minima strain CCAP 1533/1 clone 1 actin gene, partial cds blastn 33480 412 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Paravannella Paravannella minima
24590109 24590109 PRJNA1263632_P_NODE_8020_length_243_cov_0.905882_g8002_i0 PRJNA1263632 8020 243 0.905882 2.20129326 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 66.6 1.16e-11   NR XP_004347153.1 1257118 g8002 i0 43.2 1.88888888888889 81 43 97.5 2 238 2 12 91 XP_004347153.1 EF hand domain containing protein [Acanthamoeba castellanii str. Neff] diamond 459 66.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26630757 26630757 PRJNA1263632_P_NODE_1941_length_434_cov_1.692521_g1923_i0 PRJNA1263632 1941 434 1.692521 7.34554114 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 47.4 8.34e-4   NR XP_004351526.1 1257118 g1923 i0 34.2 0.504608294930876 73 48 50.5 0 403 185 26 98 XP_004351526.1 selT/selW/selH selenoprotein domain containing protein [Acanthamoeba castellanii str. Neff] diamond 219 47.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27042310 27042310 PRJNA1263632_P_NODE_8422_length_241_cov_0.916667_g8404_i0 PRJNA1263632 8422 241 0.916667 2.20916747 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 99.4 1.32e-24   NR XP_004353726.1 1257118 g8404 i0 53.2 1.87966804979253 77 36 95.9 0 239 9 4 80 XP_004353726.1 LIM domain containing protein [Acanthamoeba castellanii str. Neff] diamond 453 99.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27516254 27516254 PRJNA1263632_P_NODE_3023_length_352_cov_1.157706_g3005_i0 PRJNA1263632 3023 352 1.157706 4.07512512 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 95.9 3.18e-20   NR KAH3743581.1 1580589 g3005 i0 43.1 0.928977272727273 109 57 92.9 1 348 22 964 1067 KAH3743581.1 alpha-actinin A [Pelomyxa schiedti] diamond 327 95.9 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
28526833 28526833 PRJNA1263632_P_NODE_5247_length_276_cov_1.177340_g5229_i0 PRJNA1263632 5247 276 1.17734 3.2494584 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 102 4.64e-23   NR XP_004339395.1 1257118 g5229 i0 52.9 0.923913043478261 85 40 92.4 0 275 21 98 182 XP_004339395.1 5' nucleotidase family protein [Acanthamoeba castellanii str. Neff] diamond 255 102 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28621498 28621498 PRJNA1263632_P_NODE_8227_length_242_cov_0.911243_g8209_i0 PRJNA1263632 8227 242 0.911243 2.20520806 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 56.6 4.42e-7   NR PRP77957.1 1890364 g8209 i0 41.1 0.90495867768595 73 40 90.5 1 2 220 259 328 PRP77957.1 actin related protein 2/3 complex, subunit 1 [Planoprotostelium fungivorum] diamond 219 56.6 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
30073748 30073748 PRJNA1263632_P_NODE_6632_length_250_cov_0.870056_g6614_i0 PRJNA1263632 6632 250 0.870056 2.17514 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 47.8 1.09e-4   NR XP_004351526.1 1257118 g6614 i0 46.9 0.588 49 26 58.8 0 35 181 26 74 XP_004351526.1 selT/selW/selH selenoprotein domain containing protein [Acanthamoeba castellanii str. Neff] diamond 147 47.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30832148 30832148 PRJNA1263632_P_NODE_2594_length_378_cov_1.413115_g2576_i0 PRJNA1263632 2594 378 1.413115 5.3415747 Polysphondylium violaceum 133409 Evosea other_Eukaryota 103 1.07e-22   NR KAF2078555.1 133409 g2576 i0 48 0.992063492063492 125 44 98.4 4 6 377 272 376 KAF2078555.1 hypothetical protein CYY_000178 [Polysphondylium violaceum] diamond 375 103 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
30863712 30863712 PRJNA1263632_P_NODE_5514_length_269_cov_1.954082_g5496_i0 PRJNA1263632 5514 269 1.954082 5.25648058 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 62.8 4.03e-10   NR PRP84247.1 1890364 g5496 i0 73.8 0.468401486988848 42 11 46.8 0 268 143 63 104 PRP84247.1 40S ribosomal protein S26 [Planoprotostelium fungivorum] diamond 126 62.8 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
31355819 31355819 PRJNA1263632_P_NODE_8036_length_243_cov_0.905882_g8018_i0 PRJNA1263632 8036 243 0.905882 2.20129326 Evosea 2605435 Evosea other_Eukaryota 131 2.04e-33   NR XP_003293579.1 5786 g8018 i0 77.2 5.8641975308642 79 17 97.5 1 2 238 1917 1994 XP_003293579.1 uncharacterized protein DICPUDRAFT_158449 [Dictyostelium purpureum] diamond 1425 132 0.992424242424242 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
31748899 31748899 PRJNA1263632_P_NODE_2577_length_379_cov_1.349673_g2559_i0 PRJNA1263632 2577 379 1.349673 5.11526067 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 139 8.81e-40   NR 7SOG_A 5755 g2559 i0 58.3 0.910290237467018 115 43 91 1 350 6 3 112 7SOG_A Chain A, Actophorin [Acanthamoeba castellanii] diamond 345 139 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31875407 31875407 PRJNA1263632_P_NODE_7637_length_245_cov_0.895349_g7619_i0 PRJNA1263632 7637 245 0.895349 2.19360505 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 70.5 6.24e-12   NR XP_004340550.1 1257118 g7619 i0 42.5 2.90204081632653 80 46 98 0 240 1 338 417 XP_004340550.1 ABC2 type transporter, putative [Acanthamoeba castellanii str. Neff] diamond 711 70.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32223690 32223690 PRJNA1263632_P_NODE_7578_length_245_cov_0.895349_g7560_i0 PRJNA1263632 7578 245 0.895349 2.19360505 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 64.7 6.81e-10   NR KYR01881.1 361077 g7560 i0 49.2 0.795918367346939 65 32 78.4 1 202 11 111 175 KYR01881.1 hypothetical protein DLAC_01903 [Tieghemostelium lacteum] diamond 195 64.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
32287222 32287222 PRJNA1263632_P_NODE_3639_length_325_cov_1.142857_g3621_i0 PRJNA1263632 3639 325 1.142857 3.71428525 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 120 3.19e-30   NR PRP77957.1 1890364 g3621 i0 53.3 0.987692307692308 107 49 97.8 1 323 6 162 268 PRP77957.1 actin related protein 2/3 complex, subunit 1 [Planoprotostelium fungivorum] diamond 321 120 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;