contig_metadata
9 rows where bioproject = "PRJNA1262902" and tax_superkingdom = "Viruses"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 363482 | 363482 | PRJNA1262902_P_NODE_11701_length_242_cov_0.911243_g11659_i0 | PRJNA1262902 | 11701 | 242 | 0.911243 | 2.20520806 | Pithovirus LCDPAC02 | 2506601 | Viruses | Viruses | 52.8 | 0.022 | NTclustered | gi|1588058210|gb|MK500300.1| | 2506601 | g11659 | i0 | 94.286 | 0.144628099173554 | 35 | 1 | 14 | 1 | 13 | 47 | 67448 | 67415 | MAG: Pithovirus LCDPAC02 genomic sequence | blastn | 35 | 52.8 | 1 | Viruses | Pithoviruses | Pithovirus LCDPAC02 | |||||||
| 6741292 | 6741292 | PRJNA1262902_P_NODE_12126_length_241_cov_0.916667_g12084_i0 | PRJNA1262902 | 12126 | 241 | 0.916667 | 2.20916747 | Caudoviricetes sp. | 2832643 | Viruses | Viruses | 440 | 3.959999999999999e-119 | NTclustered | gi|2914972312|gb|OR222040.1| | 2832643 | g12084 | i0 | 99.585 | 34.9294605809129 | 241 | 1 | 100 | 0 | 1 | 241 | 124291 | 124531 | MAG: Caudoviricetes sp. isolate MSP0074 genomic sequence | blastn | 8418 | 440 | 1 | Viruses | Heunggongvirae | Uroviricota | Caudoviricetes | Caudoviricetes sp. | |||||
| 8016929 | 8016929 | PRJNA1262902_P_NODE_4587_length_284_cov_1.919431_g4545_i0 | PRJNA1262902 | 4587 | 284 | 1.919431 | 5.45118404 | Retrovirus rattus8197 | 3117313 | Viruses | Viruses | 87.4 | 1.18e-17 | NR | DBA47493.1 | 3117313 | g4545 | i0 | 75 | 0.633802816901408 | 60 | 15 | 63.4 | 0 | 243 | 64 | 550 | 609 | DBA47493.1 MAG TPA_asm: Env [Retrovirus rattus8197] | diamond | 180 | 87.4 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Retrovirus rattus8197 | |||
| 10567637 | 10567637 | PRJNA1262902_P_NODE_3349_length_309_cov_0.995763_g3307_i0 | PRJNA1262902 | 3349 | 309 | 0.995763 | 3.07690767 | Metapenaeus joyneri majanivirus | 2984280 | Viruses | Viruses | 52.8 | 0.029 | NTclustered | gi|2327925658|dbj|LC738878.1| | 2984280 | g3307 | i0 | 100 | 0.0906148867313916 | 28 | 0 | 9 | 0 | 114 | 141 | 190831 | 190804 | MAG: Metapenaeus joyneri majanivirus Tokushima2020 DNA, complete genome | blastn | 28 | 52.8 | 1 | Viruses | Naldaviricetes | Nimaviridae | Metapenaeus joyneri majanivirus | ||||||
| 27186371 | 27186371 | PRJNA1262902_P_NODE_1382_length_395_cov_1.298137_g1340_i0 | PRJNA1262902 | 1382 | 395 | 1.298137 | 5.12764115 | Betaretrovirus | 140052 | Viruses | Viruses | 90.1 | 5.58e-18 | NR | NP_955564.1 | 11757 | g1340 | i0 | 45.2 | 6.65316455696203 | 73 | 40 | 55.4 | 0 | 295 | 77 | 755 | 827 | NP_955564.1 p30DU-p13PR-RT-IN [Mouse mammary tumor virus] | diamond | 2628 | 90.1 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Betaretrovirus | Betaretrovirus murmamtum | ||
| 28147896 | 28147896 | PRJNA1262902_P_NODE_9425_length_247_cov_0.885057_g9383_i0 | PRJNA1262902 | 9425 | 247 | 0.885057 | 2.18609079 | Caudoviricetes sp. | 2832643 | Viruses | Viruses | 68.9 | 4.77e-12 | NR | DAS40667.1 | 2832643 | g9383 | i0 | 64.6 | 1.25101214574899 | 48 | 17 | 58.3 | 0 | 146 | 3 | 3 | 50 | DAS40667.1 MAG TPA: chromosome partitioning protein [Caudoviricetes sp.] | diamond | 309 | 68.9 | 1 | Viruses | Heunggongvirae | Uroviricota | Caudoviricetes | Caudoviricetes sp. | |||||
| 30263774 | 30263774 | PRJNA1262902_P_NODE_2712_length_325_cov_1.726190_g2670_i0 | PRJNA1262902 | 2712 | 325 | 1.72619 | 5.6101175 | Mouse mammary tumor virus | 11757 | Viruses | Viruses | 93.6 | 1.45e-19 | NR | NP_955564.1 | 11757 | g2670 | i0 | 43.8 | 3.87692307692308 | 105 | 59 | 96.9 | 0 | 325 | 11 | 630 | 734 | NP_955564.1 p30DU-p13PR-RT-IN [Mouse mammary tumor virus] | diamond | 1260 | 93.6 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Betaretrovirus | Betaretrovirus murmamtum | ||
| 31622439 | 31622439 | PRJNA1262902_P_NODE_7296_length_251_cov_1.679775_g7254_i0 | PRJNA1262902 | 7296 | 251 | 1.679775 | 4.21623525 | Brevundimonas phage vB_BgoS-Bajun | 2948594 | Viruses | Viruses | 79.7 | 9.21e-16 | NR | UTC29866.1 | 2948594 | g7254 | i0 | 53 | 0.99203187250996006 | 83 | 38 | 98 | 1 | 4 | 249 | 10 | 92 | UTC29866.1 hypothetical protein BAJUN_02360 [Brevundimonas phage vB_BgoS-Bajun] | diamond | 249 | 79.7 | 1 | Viruses | Heunggongvirae | Uroviricota | Caudoviricetes | Brevundimonas phage vB_BgoS-Bajun | |||||
| 32287213 | 32287213 | PRJNA1262902_P_NODE_12679_length_226_cov_2.183007_g12637_i0 | PRJNA1262902 | 12679 | 226 | 2.183007 | 4.93359582 | Retrovirus rattus8197 | 3117313 | Viruses | Viruses | 91.3 | 2.45e-19 | NR | DBA47493.1 | 3117313 | g12637 | i0 | 66.1 | 0.783185840707965 | 59 | 20 | 78.3 | 0 | 196 | 20 | 126 | 184 | DBA47493.1 MAG TPA_asm: Env [Retrovirus rattus8197] | diamond | 177 | 91.3 | 1 | Viruses | Pararnavirae | Artverviricota | Revtraviricetes | Ortervirales | Retroviridae | Retrovirus rattus8197 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;