RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1262902" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1262902 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18215246 18215246 PRJNA1262902_P_NODE_115_length_1049_cov_5.322746_g94_i0 PRJNA1262902 115 1049 5.322746 55.83560554 Candidatus Melainabacteria bacterium MEL.A1 1899017 Bacteria Bacteria 749 0   NTclustered gi|1079475020|gb|CP017245.1| 1899017 g94 i0 80.575 135.178265014299 1009 165 94 30 59 1049 1478459 1477464 Candidatus Melainabacteria bacterium MEL.A1 chromosome, complete genome blastn 141802 749 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium MEL.A1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;