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contig_metadata

33 rows where bioproject = "PRJNA1262902" and tax_phylum = "Acidobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 33 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1262902 · 33 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5466905 5466905 PRJNA1262902_P_NODE_9405_length_247_cov_0.885057_g9363_i0 PRJNA1262902 9405 247 0.885057 2.18609079 Luteitalea pratensis 1855912 Bacteria Bacteria 270 5.659999999999999e-68   NTclustered gi|1016914409|gb|CP015136.1| 1855912 g9363 i0 87.879 64.7935222672065 231 27 93 1 16 245 611669 611899 Luteitalea pratensis strain DSM 100886 chromosome, complete genome blastn 16004 270 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales Vicinamibacteraceae Luteitalea Luteitalea pratensis
15666386 15666386 PRJNA1262902_P_NODE_10173_length_245_cov_0.895349_g10131_i0 PRJNA1262902 10173 245 0.895349 2.19360505 Pseudomonadati 3379134 Bacteria Bacteria 109 6.080000000000001e-27   NR HZU23467.1 2282142 g10131 i0 72.8 11.9020408163265 81 22 99.2 0 2 244 106 186 HZU23467.1 isocitrate lyase/phosphoenolpyruvate mutase family protein [Terriglobales bacterium] diamond 2916 109 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales     Terriglobales bacterium
18215323 18215323 PRJNA1262902_P_NODE_9335_length_247_cov_0.885057_g9293_i0 PRJNA1262902 9335 247 0.885057 2.18609079 Candidatus Sulfomarinibacteraceae bacterium 3069604 Bacteria Bacteria 112 1.23e-26   NR HSO30689.1 3069604 g9293 i0 75.6 0.995951417004049 82 6 99.6 2 246 1 424 491 HSO30689.1 EAL domain-containing protein [Candidatus Sulfomarinibacteraceae bacterium] diamond 246 112 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia Thermoanaerobaculales Candidatus Sulfomarinibacteraceae   Candidatus Sulfomarinibacteraceae bacterium
20765133 20765133 PRJNA1262902_P_NODE_7977_length_250_cov_0.870056_g7935_i0 PRJNA1262902 7977 250 0.870056 2.17514 Acidobacteriota bacterium 1978231 Bacteria Bacteria 152 7.479999999999997e-42   NR PYR61345.1 1978231 g7935 i0 90.4 5.976 83 8 99.6 0 1 249 116 198 PYR61345.1 MAG: aldehyde dehydrogenase [Acidobacteriota bacterium] diamond 1494 152 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
24589822 24589822 PRJNA1262902_P_NODE_12360_length_241_cov_0.916667_g12318_i0 PRJNA1262902 12360 241 0.916667 2.20916747 Acidobacteriota bacterium 1978231 Bacteria Bacteria 63.2 1.9e-9   NR RPI54734.1 1978231 g12318 i0 49.4 2.78838174273859 85 24 97.1 3 236 3 1 73 RPI54734.1 MAG: RNase adapter RapZ [Acidobacteriota bacterium] diamond 672 63.2 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
24589872 24589872 PRJNA1262902_P_NODE_8640_length_248_cov_1.685714_g8598_i0 PRJNA1262902 8640 248 1.685714 4.18057072 Luteitalea sp. TBR-22 2802971 Bacteria Bacteria 333 7.149999999999999e-87   NTclustered gi|2131947417|dbj|AP024452.2| 2802971 g8598 i0 91.667 111.927419354839 240 20 99 0 9 248 4170644 4170405 Vicinamibacteria bacterium TBR-22 DNA, complete genome blastn 27758 333 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales Vicinamibacteraceae Luteitalea Luteitalea sp. TBR-22
26680091 26680091 PRJNA1262902_P_NODE_10161_length_245_cov_0.895349_g10119_i0 PRJNA1262902 10161 245 0.895349 2.19360505 Pseudomonadati 3379134 Bacteria Bacteria 158 1.18e-44   NR HEY2293276.1 2651171 g10119 i0 88.9 4.95918367346939 81 9 99.2 0 2 244 83 163 HEY2293276.1 DcaP family trimeric outer membrane transporter [Thermoanaerobaculia bacterium] diamond 1215 159 0.993710691823899 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
26947243 26947243 PRJNA1262902_P_NODE_11902_length_242_cov_0.911243_g11860_i0 PRJNA1262902 11902 242 0.911243 2.20520806 Acidobacteriota bacterium 1978231 Bacteria Bacteria 75.5 9.83e-14   NR PYR23114.1 1978231 g11860 i0 49.3 0.90495867768595 73 36 89.3 1 26 241 22 94 PYR23114.1 MAG: hypothetical protein DMF98_19130 [Acidobacteriota bacterium] diamond 219 75.5 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27042297 27042297 PRJNA1262902_P_NODE_10422_length_245_cov_0.895349_g10380_i0 PRJNA1262902 10422 245 0.895349 2.19360505 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 68.2 4.25e-11   NR HXO28680.1 2651171 g10380 i0 46.3 0.979591836734694 80 43 98 0 4 243 694 773 HXO28680.1 hypothetical protein [Thermoanaerobaculia bacterium] diamond 240 68.2 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
27231896 27231896 PRJNA1262902_P_NODE_10283_length_245_cov_0.895349_g10241_i0 PRJNA1262902 10283 245 0.895349 2.19360505 Luteitalea sp. 2004800 Bacteria Bacteria 89.7 6.16e-19   NR HTV03296.1 2004800 g10241 i0 79.2 1.28571428571429 53 11 64.9 0 161 3 5 57 HTV03296.1 glycosyltransferase family 4 protein [Luteitalea sp.] diamond 315 89.7 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales Vicinamibacteraceae Luteitalea Luteitalea sp.
27313200 27313200 PRJNA1262902_P_NODE_6863_length_256_cov_1.273224_g6821_i0 PRJNA1262902 6863 256 1.273224 3.25945344 Candidatus Acidiferrum 2817524 Bacteria Bacteria 142 7.47e-40   NR PYU05411.1 1978231 g6821 i0 71.8 1.9921875 85 24 99.6 0 1 255 156 240 PYU05411.1 MAG: hypothetical protein DMG34_08380, partial [Acidobacteriota bacterium] diamond 510 142 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27516247 27516247 PRJNA1262902_P_NODE_10663_length_244_cov_0.900585_g10621_i0 PRJNA1262902 10663 244 0.900585 2.1974274 Luteitalea sp. 2004800 Bacteria Bacteria 89.4 1.52e-18   NR MPY87456.1 2004800 g10621 i0 55.6 1.99180327868852 81 36 99.6 0 243 1 665 745 MPY87456.1 hypothetical protein [Luteitalea sp.] diamond 486 89.4 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales Vicinamibacteraceae Luteitalea Luteitalea sp.
27674321 27674321 PRJNA1262902_P_NODE_10904_length_244_cov_0.900585_g10862_i0 PRJNA1262902 10904 244 0.900585 2.1974274 Acidobacteriota bacterium 1978231 Bacteria Bacteria 77 2.18e-14   NR MDQ3747727.1 1978231 g10862 i0 76.5 0.627049180327869 51 12 62.7 0 92 244 1 51 MDQ3747727.1 hypothetical protein [Acidobacteriota bacterium] diamond 153 77 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27895043 27895043 PRJNA1262902_P_NODE_5005_length_279_cov_1.126214_g4963_i0 PRJNA1262902 5005 279 1.126214 3.14213706 Candidatus Sulfomarinibacteraceae bacterium 3069604 Bacteria Bacteria 70.5 7.95e-12   NR HSO30498.1 3069604 g4963 i0 46.5 0.763440860215054 71 36 75.3 2 277 68 112 181 HSO30498.1 hypothetical protein [Candidatus Sulfomarinibacteraceae bacterium] diamond 213 70.5 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia Thermoanaerobaculales Candidatus Sulfomarinibacteraceae   Candidatus Sulfomarinibacteraceae bacterium
28242292 28242292 PRJNA1262902_P_NODE_3566_length_303_cov_1.339130_g3524_i0 PRJNA1262902 3566 303 1.33913 4.0575639 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 75.9 1.7e-13   NR MCG3193085.1 2651171 g3524 i0 39.4 0.98019801980198 99 55 98 1 4 300 327 420 MCG3193085.1 hypothetical protein [Thermoanaerobaculia bacterium] diamond 297 75.9 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
28639392 28639392 PRJNA1262902_P_NODE_8527_length_249_cov_0.875000_g8485_i0 PRJNA1262902 8527 249 0.875 2.17875 Bacteria 2 Bacteria Bacteria 99.4 4.92e-22   NR MEO5819003.1 2590576 g8485 i0 54.2 3 83 38 100 0 249 1 133 215 MEO5819003.1 response regulator [Vicinamibacteraceae bacterium] diamond 747 100 0.994 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales Vicinamibacteraceae   Vicinamibacteraceae bacterium
29095086 29095086 PRJNA1262902_P_NODE_10448_length_245_cov_0.895349_g10406_i0 PRJNA1262902 10448 245 0.895349 2.19360505 Blastocatellia bacterium 2052146 Bacteria Bacteria 125 2.1999999999999994e-33   NR HZS06336.1 2052146 g10406 i0 75 0.979591836734694 80 20 98 0 244 5 75 154 HZS06336.1 LLM class flavin-dependent oxidoreductase [Blastocatellia bacterium] diamond 240 125 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
29144687 29144687 PRJNA1262902_P_NODE_4369_length_288_cov_1.241860_g4327_i0 PRJNA1262902 4369 288 1.24186 3.5765568 Pseudomonadati 3379134 Bacteria Bacteria 58.5 1.76e-7   NR MDX2043100.1 1978231 g4327 i0 66.7 7.35416666666667 42 14 43.8 0 3 128 775 816 MDX2043100.1 CHASE2 domain-containing protein [Acidobacteriota bacterium] diamond 2118 58.5 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29347635 29347635 PRJNA1262902_P_NODE_4769_length_282_cov_1.196172_g4727_i0 PRJNA1262902 4769 282 1.196172 3.37320504 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 163 1.85e-46   NR HJZ74927.1 2910147 g4727 i0 82.8 3.95744680851064 93 16 98.9 0 3 281 223 315 HJZ74927.1 carboxypeptidase-like regulatory domain-containing protein [Vicinamibacterales bacterium] diamond 1116 163 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
29410592 29410592 PRJNA1262902_P_NODE_11429_length_243_cov_0.905882_g11387_i0 PRJNA1262902 11429 243 0.905882 2.20129326 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 71.2 3.34e-12   NR HEX2309607.1 2910147 g11387 i0 53.2 0.975308641975309 79 37 97.5 0 7 243 365 443 HEX2309607.1 sodium:solute symporter family protein [Vicinamibacterales bacterium] diamond 237 71.2 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
30136703 30136703 PRJNA1262902_P_NODE_10932_length_244_cov_0.900585_g10890_i0 PRJNA1262902 10932 244 0.900585 2.1974274 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 127 1.32e-34   NR HZA34669.1 2910147 g10890 i0 82.3 3.90983606557377 79 14 97.1 0 3 239 58 136 HZA34669.1 O-methyltransferase [Vicinamibacterales bacterium] diamond 954 127 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
30200051 30200051 PRJNA1262902_P_NODE_11412_length_243_cov_0.905882_g11370_i0 PRJNA1262902 11412 243 0.905882 2.20129326 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 51.2 6.59e-6   NR MBP7677118.1 2651171 g11370 i0 58.5 1.01234567901235 41 17 50.6 0 241 119 73 113 MBP7677118.1 type II toxin-antitoxin system PemK/MazF family toxin [Thermoanaerobaculia bacterium] diamond 246 51.2 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
30200054 30200054 PRJNA1262902_P_NODE_4512_length_285_cov_1.768868_g4470_i0 PRJNA1262902 4512 285 1.768868 5.0412738 Luteitalea pratensis 1855912 Bacteria Bacteria 67.8 9.47e-11   NR WP_157899514.1 1855912 g4470 i0 72.7 0.91578947368421 44 12 46.3 0 285 154 422 465 WP_157899514.1 Gfo/Idh/MocA family protein [Luteitalea pratensis] diamond 261 67.8 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales Vicinamibacteraceae Luteitalea Luteitalea pratensis
30281709 30281709 PRJNA1262902_P_NODE_7532_length_251_cov_0.865169_g7490_i0 PRJNA1262902 7532 251 0.865169 2.17157419 Bacteria 2 Bacteria Bacteria 144 1.0699999999999998e-37   NR PYR54612.1 1978231 g7490 i0 84.1 4.92430278884462 82 13 98 0 2 247 587 668 PYR54612.1 MAG: hypothetical protein DMF85_21800, partial [Acidobacteriota bacterium] diamond 1236 145 0.993103448275862 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30579177 30579177 PRJNA1262902_P_NODE_11753_length_242_cov_0.911243_g11711_i0 PRJNA1262902 11753 242 0.911243 2.20520806 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 46.2 0.00193   NR HTI38909.1 2910147 g11711 i0 50 1.61157024793388 36 18 44.6 0 3 110 205 240 HTI38909.1 PEP-CTERM sorting domain-containing protein [Vicinamibacterales bacterium] diamond 390 46.2 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
30832138 30832138 PRJNA1262902_P_NODE_11094_length_243_cov_1.358824_g11052_i0 PRJNA1262902 11094 243 1.358824 3.30194232 Luteitalea sp. 2004800 Bacteria Bacteria 102 2.3699999999999998e-23   NR WP_291984832.1 2004800 g11052 i0 65 0.987654320987654 80 28 98.8 0 3 242 272 351 WP_291984832.1 DUF4175 family protein, partial [Luteitalea sp.] diamond 240 102 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales Vicinamibacteraceae Luteitalea Luteitalea sp.
30832141 30832141 PRJNA1262902_P_NODE_12354_length_241_cov_0.916667_g12312_i0 PRJNA1262902 12354 241 0.916667 2.20916747 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 150 1.13e-42   NR MEO6589313.1 2283092 g12312 i0 83.5 0.983402489626556 79 13 98.3 0 239 3 164 242 MEO6589313.1 SCO family protein [Pyrinomonadaceae bacterium] diamond 237 150 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
31306151 31306151 PRJNA1262902_P_NODE_8575_length_249_cov_0.875000_g8533_i0 PRJNA1262902 8575 249 0.875 2.17875 Acidobacteriota bacterium 1978231 Bacteria Bacteria 59.7 4.18e-8   NR MCU1228779.1 1978231 g8533 i0 35.6 0.879518072289157 73 47 88 0 221 3 92 164 MCU1228779.1 hypothetical protein [Acidobacteriota bacterium] diamond 219 59.7 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31418889 31418889 PRJNA1262902_P_NODE_11576_length_242_cov_1.449704_g11534_i0 PRJNA1262902 11576 242 1.449704 3.50828368 Pseudomonadati 3379134 Bacteria Bacteria 53.9 4.28e-6   NR HXI11743.1 2651171 g11534 i0 60.5 2.62809917355372 38 15 47.1 0 56 169 625 662 HXI11743.1 proprotein convertase P-domain-containing protein [Thermoanaerobaculia bacterium] diamond 636 54.3 0.992633517495396 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
31608728 31608728 PRJNA1262902_P_NODE_9556_length_246_cov_1.676301_g9514_i0 PRJNA1262902 9556 246 1.676301 4.12370046 Bacteria 2 Bacteria Bacteria 148 1.44e-39   NR MBS1792342.1 1978231 g9514 i0 86.4 5.92682926829268 81 11 98.8 0 245 3 461 541 MBS1792342.1 flagellar biosynthesis protein FlhA [Acidobacteriota bacterium] diamond 1458 149 0.993288590604027 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32634323 32634323 PRJNA1262902_P_NODE_10760_length_244_cov_0.900585_g10718_i0 PRJNA1262902 10760 244 0.900585 2.1974274 Acidobacteriota bacterium 1978231 Bacteria Bacteria 125 4.42e-33   NR MFO7303064.1 1978231 g10718 i0 76.3 1.9672131147541 80 19 98.4 0 1 240 45 124 MFO7303064.1 diguanylate cyclase [Acidobacteriota bacterium] diamond 480 125 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32760525 32760525 PRJNA1262902_P_NODE_11080_length_243_cov_1.405882_g11038_i0 PRJNA1262902 11080 243 1.405882 3.41629326 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 89.4 1.93e-19   NR HET7220345.1 2910147 g11038 i0 59.7 0.827160493827161 67 27 82.7 0 240 40 187 253 HET7220345.1 peptidoglycan editing factor PgeF [Vicinamibacterales bacterium] diamond 201 89.4 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
32809763 32809763 PRJNA1262902_P_NODE_4060_length_293_cov_1.400000_g4018_i0 PRJNA1262902 4060 293 1.4 4.102 Bacteria 2 Bacteria Bacteria 131 4.15e-33   NR HKS39919.1 2052146 g4018 i0 73.7 3.86006825938567 95 24 97.3 1 293 9 299 392 HKS39919.1 C25 family cysteine peptidase [Blastocatellia bacterium] diamond 1131 132 0.992424242424242 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;