RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1262902", tax_clade = "Opisthokonta" and tax_phylum = "Hemichordata"

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tax_superkingdom 1

tax_phylum 1

  • Hemichordata · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA1262902 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28260106 28260106 PRJNA1262902_P_NODE_1086_length_433_cov_1.333333_g1044_i0 PRJNA1262902 1086 433 1.333333 5.77333189 Metazoa 33208 Hemichordata other_Eukaryota 110 1.37e-26   NR XP_070542022.1 63121 g1044 i0 56.6 19.5519630484988 83 36 57.5 0 428 180 155 237 XP_070542022.1 ribosome biogenesis protein NSA2 homolog [Ptychodera flava] diamond 8466 111 0.990990990990991 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava
30863707 30863707 PRJNA1262902_P_NODE_5254_length_275_cov_1.386139_g5212_i0 PRJNA1262902 5254 275 1.386139 3.81188225 Ptychodera flava 63121 Hemichordata other_Eukaryota 59.7 1.1e-8   NR XP_070580998.1 63121 g5212 i0 50.9 62.6290909090909 55 26 58.9 1 233 72 104 158 XP_070580998.1 SUMO-conjugating enzyme UBC9-B [Ptychodera flava] diamond 17223 59.7 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;