contig_metadata
13 rows where bioproject = "PRJNA1262902" and tax_clade = "Cyanobacteriota/Melainabacteria group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2914253 | 2914253 | PRJNA1262902_P_NODE_4883_length_280_cov_1.705314_g4841_i0 | PRJNA1262902 | 4883 | 280 | 1.705314 | 4.7748792 | cyanobacterium endosymbiont of Rhopalodia gibba | 309035 | Bacteria | Bacteria | 52.8 | 0.026 | NTclustered | gi|2814330024|gb|CP067995.1| | 309035 | g4841 | i0 | 100 | 0.1 | 28 | 0 | 10 | 0 | 215 | 242 | 1716845 | 1716818 | MAG: cyanobacterium endosymbiont of Rhopalodia gibba isolate 17Bon1-SB chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | cyanobacterium endosymbiont of Rhopalodia gibba | |||||
| 4190623 | 4190623 | PRJNA1262902_P_NODE_4184_length_291_cov_1.059633_g4142_i0 | PRJNA1262902 | 4184 | 291 | 1.059633 | 3.08353203 | Aphanizomenon flos-aquae | 1176 | Bacteria | Bacteria | 52.8 | 0.027 | NTclustered | gi|2004375065|gb|CP051188.1| | 2717882 | g4142 | i0 | 94.286 | 0.120274914089347 | 35 | 1 | 12 | 1 | 142 | 176 | 3901901 | 3901934 | Aphanizomenon flos-aquae DEX188 chromosome, complete genome | blastn | 35 | 52.8 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Aphanizomenonaceae | Aphanizomenon | Aphanizomenon flos-aquae | |
| 7431939 | 7431939 | PRJNA1262902_P_NODE_2006_length_353_cov_1.085714_g1964_i0 | PRJNA1262902 | 2006 | 353 | 1.085714 | 3.83257042 | Thermoleptolyngbya | 2303528 | Bacteria | Bacteria | 56.5 | 0.003 | NTclustered | gi|2592622306|gb|CP053540.1| | 2547457 | g1964 | i0 | 100 | 1.51274787535411 | 30 | 0 | 10 | 0 | 102 | 131 | 338079 | 338050 | Thermoleptolyngbya oregonensis NK1-22 chromosome, complete genome | blastn | 534 | 56.5 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Oculatellales | Oculatellaceae | Thermoleptolyngbya | Thermoleptolyngbya oregonensis | |
| 16940838 | 16940838 | PRJNA1262902_P_NODE_9674_length_246_cov_0.890173_g9632_i0 | PRJNA1262902 | 9674 | 246 | 0.890173 | 2.18982558 | Nostoc sp. 'Lobaria pulmonaria (5183) cyanobiont' | 1618022 | Bacteria | Bacteria | 126 | 1.29e-24 | NTclustered | gi|1349670869|gb|CP026692.1| | 1618022 | g9632 | i0 | 86.842 | 1.20325203252033 | 114 | 14 | 46 | 1 | 103 | 216 | 586264 | 586376 | Nostoc sp. 'Lobaria pulmonaria (5183) cyanobiont' strain 5183 chromosome, complete genome | blastn | 296 | 126 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Nostocaceae | Nostoc | Nostoc sp. 'Lobaria pulmonaria (5183) cyanobiont' | |
| 18215246 | 18215246 | PRJNA1262902_P_NODE_115_length_1049_cov_5.322746_g94_i0 | PRJNA1262902 | 115 | 1049 | 5.322746 | 55.83560554 | Candidatus Melainabacteria bacterium MEL.A1 | 1899017 | Bacteria | Bacteria | 749 | 0 | NTclustered | gi|1079475020|gb|CP017245.1| | 1899017 | g94 | i0 | 80.575 | 135.178265014299 | 1009 | 165 | 94 | 30 | 59 | 1049 | 1478459 | 1477464 | Candidatus Melainabacteria bacterium MEL.A1 chromosome, complete genome | blastn | 141802 | 749 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Candidatus Melainabacteria | Candidatus Melainabacteria bacterium MEL.A1 | |||||
| 18215291 | 18215291 | PRJNA1262902_P_NODE_6275_length_262_cov_1.582011_g6233_i0 | PRJNA1262902 | 6275 | 262 | 1.582011 | 4.14486882 | Synechococcus sp. LTW-R | 2751170 | Bacteria | Bacteria | 52.8 | 0.024 | NTclustered | gi|1891299085|gb|CP059060.1| | 2751170 | g6233 | i0 | 100 | 0.106870229007634 | 28 | 0 | 11 | 0 | 124 | 151 | 1878264 | 1878237 | Synechococcus sp. LTW-R chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Synechococcales | Synechococcaceae | Synechococcus | Synechococcus sp. LTW-R | |
| 19489526 | 19489526 | PRJNA1262902_P_NODE_1016_length_442_cov_3.409214_g974_i0 | PRJNA1262902 | 1016 | 442 | 3.409214 | 15.06872588 | Pseudanabaena mucicola | 71190 | Bacteria | Bacteria | 56.5 | 0.003 | NTclustered | gi|2522923893|gb|CP097329.1| | 2942274 | g974 | i0 | 94.595 | 1.44343891402715 | 37 | 1 | 8 | 1 | 372 | 408 | 525914 | 525879 | Pseudanabaena mucicola str. Chao 1806 chromosome, complete genome | blastn | 638 | 56.5 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Pseudanabaenales | Pseudanabaenaceae | Pseudanabaena | Pseudanabaena mucicola | |
| 27295156 | 27295156 | PRJNA1262902_P_NODE_9503_length_247_cov_0.885057_g9461_i0 | PRJNA1262902 | 9503 | 247 | 0.885057 | 2.18609079 | Aliterella atlantica | 1827278 | Bacteria | Bacteria | 127 | 4.34e-32 | NR | WP_072044968.1 | 1827278 | g9461 | i0 | 77.8 | 0.983805668016194 | 81 | 18 | 98.4 | 0 | 3 | 245 | 35 | 115 | WP_072044968.1 putative bifunctional diguanylate cyclase/phosphodiesterase [Aliterella atlantica] | diamond | 243 | 127 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Chroococcidiopsidales | Aliterellaceae | Aliterella | Aliterella atlantica | |
| 28052943 | 28052943 | PRJNA1262902_P_NODE_11905_length_242_cov_0.911243_g11863_i0 | PRJNA1262902 | 11905 | 242 | 0.911243 | 2.20520806 | Nostoc mirabile | 2907820 | Bacteria | Bacteria | 117 | 2.68e-28 | NR | WP_229499096.1 | 2907820 | g11863 | i0 | 81.3 | 0.991735537190083 | 80 | 15 | 99.2 | 0 | 3 | 242 | 482 | 561 | WP_229499096.1 xanthine dehydrogenase family protein molybdopterin-binding subunit [Nostoc mirabile] | diamond | 240 | 117 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Nostocales | Nostocaceae | Nostoc | Nostoc mirabile | |
| 28589945 | 28589945 | PRJNA1262902_P_NODE_8727_length_248_cov_0.880000_g8685_i0 | PRJNA1262902 | 8727 | 248 | 0.88 | 2.1824 | Synechocystis sp. PCC 75 | 1143 | Bacteria | Bacteria | 152 | 4.99e-45 | NR | WP_009629898.1 | 927677 | g8685 | i0 | 97.6 | 0.991935483870968 | 82 | 2 | 99.2 | 0 | 2 | 247 | 57 | 138 | WP_009629898.1 recombinase family protein [Synechocystis sp. PCC 7509] | diamond | 246 | 152 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Synechococcales | Merismopediaceae | Synechocystis | Synechocystis sp. PCC 7509 | |
| 29554635 | 29554635 | PRJNA1262902_P_NODE_7890_length_250_cov_0.870056_g7848_i0 | PRJNA1262902 | 7890 | 250 | 0.870056 | 2.17514 | Cyanobacteriota/Melainabacteria group | 1798711 | Bacteria | Bacteria | 60.8 | 1.16e-8 | NR | WP_286003993.1 | 1471433 | g7848 | i0 | 59.3 | 1.284 | 54 | 22 | 64.8 | 0 | 249 | 88 | 218 | 271 | WP_286003993.1 hypothetical protein [Geitlerinema calcuttense] | diamond | 321 | 60.8 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Geitlerinematales | Geitlerinemataceae | Geitlerinema | Geitlerinema calcuttense | |
| 30136707 | 30136707 | PRJNA1262902_P_NODE_6732_length_257_cov_1.592391_g6690_i0 | PRJNA1262902 | 6732 | 257 | 1.592391 | 4.09244487 | Pseudanabaenaceae cyanobacterium LEGE 13415 | 2777976 | Bacteria | Bacteria | 89 | 5.64e-19 | NR | MBE9012643.1 | 2777976 | g6690 | i0 | 83.1 | 1.51750972762646 | 59 | 10 | 68.9 | 0 | 10 | 186 | 2 | 60 | MBE9012643.1 AAA family ATPase [Pseudanabaenaceae cyanobacterium LEGE 13415] | diamond | 390 | 89 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Pseudanabaenales | Pseudanabaenaceae | Pseudanabaenaceae cyanobacterium LEGE 13415 | ||
| 31053637 | 31053637 | PRJNA1262902_P_NODE_10355_length_245_cov_0.895349_g10313_i0 | PRJNA1262902 | 10355 | 245 | 0.895349 | 2.19360505 | Synechococcaceae cyanobacterium SM1_2_3 | 2720456 | Bacteria | Bacteria | 148 | 3.4599999999999987e-41 | NR | NJM12592.1 | 2720456 | g10313 | i0 | 86.4 | 0.991836734693878 | 81 | 11 | 99.2 | 0 | 1 | 243 | 170 | 250 | NJM12592.1 N4-gp56 family major capsid protein [Synechococcaceae cyanobacterium SM1_2_3] | diamond | 243 | 148 | 1 | Bacteria | Cyanobacteriota/Melainabacteria group | Bacillati | Cyanobacteriota | Cyanophyceae | Synechococcales | Synechococcaceae | Synechococcaceae cyanobacterium SM1_2_3 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;