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contig_metadata

9 rows where bioproject = "PRJNA1255065" and tax_superkingdom = "Archaea"

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tax_kingdom 2

analysis 2

tax_superkingdom 1

  • Archaea · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA1255065 · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24586479 24586479 PRJNA1255065_P_NODE_145900_length_163_cov_0.912281_g143672_i0 PRJNA1255065 145900 163 0.912281 1.48701803 Haloarcula sp. CBA1115 1592728 Archaea Archaea 196 5.93e-46   NTclustered gi|749699433|gb|CP010529.1| 1592728 g143672 i0 88.344 4.45398773006135 163 19 100 0 1 163 1673284 1673122 Haloarcula sp. CBA1115, complete genome blastn 726 196 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Haloarcula Haloarcula sp. CBA1115
26661988 26661988 PRJNA1255065_P_NODE_144861_length_163_cov_0.912281_g142633_i0 PRJNA1255065 144861 163 0.912281 1.48701803 Candidatus Nitrosocosmicus sp. SS 2563600 Archaea Archaea 104 3.770000000000001e-27   NR WP_149863215.1 2563600 g142633 i0 90.6 0.975460122699387 53 5 97.5 0 3 161 7 59 WP_149863215.1 hypothetical protein [Candidatus Nitrosocosmicus sp. SS] diamond 159 104 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus agrestis
26789120 26789120 PRJNA1255065_P_NODE_146441_length_163_cov_0.912281_g144213_i0 PRJNA1255065 146441 163 0.912281 1.48701803 Natronococcus jeotgali 413812 Archaea Archaea 107 3.15e-26   NR WP_008423015.1 413812 g144213 i0 92.5 2.92638036809816 53 4 97.5 0 161 3 110 162 WP_008423015.1 tartrate dehydrogenase [Natronococcus jeotgali] diamond 477 107 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natronococcus Natronococcus jeotgali
29000515 29000515 PRJNA1255065_P_NODE_121548_length_167_cov_0.881356_g119320_i0 PRJNA1255065 121548 167 0.881356 1.47186452 Candidatus Nitrosocosmicus sp. SS 2563600 Archaea Archaea 99.4 6.079999999999999e-23   NR WP_149864399.1 2563600 g119320 i0 87 0.970059880239521 54 7 97 0 164 3 188 241 WP_149864399.1 glycosyltransferase [Candidatus Nitrosocosmicus sp. SS] diamond 162 99.4 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus agrestis
29979041 29979041 PRJNA1255065_P_NODE_94251_length_181_cov_0.856061_g92023_i0 PRJNA1255065 94251 181 0.856061 1.54947041 archaeon 1906665 Archaea Archaea 50.1 1.05e-5   NR RYH28354.1 1906665 g92023 i0 61 0.679558011049724 41 16 68 0 181 59 57 97 RYH28354.1 MAG: ABC-F family ATP-binding cassette domain-containing protein [archaeon] diamond 123 50.1 1 Archaea               archaeon
30832070 30832070 PRJNA1255065_P_NODE_98514_length_176_cov_0.889764_g96286_i0 PRJNA1255065 98514 176 0.889764 1.56598464 Halarchaeum nitratireducens 489913 Archaea Archaea 40.4 0.0252   NR WP_188880210.1 489913 g96286 i0 35.6 1.00568181818182 59 30 86.9 1 170 18 7 65 WP_188880210.1 hypothetical protein [Halarchaeum nitratireducens] diamond 177 40.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halarchaeum Halarchaeum nitratireducens
32033715 32033715 PRJNA1255065_P_NODE_76298_length_207_cov_1.316456_g74070_i0 PRJNA1255065 76298 207 1.316456 2.72506392 Halobacterium sp. R2-5 2715751 Archaea Archaea 42.4 0.0323   NR WP_167247438.1 2715751 g74070 i0 60.7 0.405797101449275 28 11 40.6 0 48 131 873 900 WP_167247438.1 DEAD/DEAH box helicase [Halobacterium sp. R2-5] diamond 84 42.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halobacterium Halobacterium sp. R2-5
32540175 32540175 PRJNA1255065_P_NODE_84959_length_193_cov_1.083333_g82731_i0 PRJNA1255065 84959 193 1.083333 2.09083269 archaeon 1906665 Archaea Archaea 79.3 1.66e-15   NR RYH20254.1 1906665 g82731 i0 60.3 0.979274611398964 63 25 97.9 0 3 191 229 291 RYH20254.1 MAG: hypothetical protein EON65_24020 [archaeon] diamond 189 79.3 1 Archaea               archaeon
32665915 32665915 PRJNA1255065_P_NODE_108960_length_169_cov_0.866667_g106732_i0 PRJNA1255065 108960 169 0.866667 1.46466723 archaeon 1906665 Archaea Archaea 81.6 1.12e-16   NR RYG67299.1 1906665 g106732 i0 65.5 0.976331360946746 55 19 97.6 0 3 167 152 206 RYG67299.1 MAG: hypothetical protein EON64_07745, partial [archaeon] diamond 165 81.6 1 Archaea               archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;