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contig_metadata

20 rows where bioproject = "PRJNA1255065" and tax_phylum = "Verrucomicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 20 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1255065 · 20 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7431073 7431073 PRJNA1255065_P_NODE_144106_length_163_cov_0.912281_g141878_i0 PRJNA1255065 144106 163 0.912281 1.48701803 Opitutus sp. 1913982 Bacteria Bacteria 86.7 9.63e-19   NR MBA3848571.1 1913982 g141878 i0 62.3 0.975460122699387 53 20 97.5 0 1 159 85 137 MBA3848571.1 alpha/beta hydrolase [Opitutus sp.] diamond 159 86.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Opitutus Opitutus sp.
15663162 15663162 PRJNA1255065_P_NODE_153373_length_162_cov_0.920354_g151145_i0 PRJNA1255065 153373 162 0.920354 1.49097348 Roseimicrobium sp. ORNL1 2711231 Bacteria Bacteria 217 4.5199999999999996e-52   NTclustered gi|1815841271|gb|CP049143.1| 2711231 g151145 i0 90.741 1 162 15 100 0 1 162 3695970 3696131 Roseimicrobium sp. ORNL1 chromosome, complete genome blastn 162 217 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Roseimicrobium Roseimicrobium sp. ORNL1
27453232 27453232 PRJNA1255065_P_NODE_126743_length_166_cov_0.888889_g124515_i0 PRJNA1255065 126743 166 0.888889 1.47555574 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 106 1.12e-25   NR RYD40511.1 2026800 g124515 i0 92.7 0.993975903614458 55 4 99.4 0 1 165 156 210 RYD40511.1 MAG: hypothetical protein EOP83_35170, partial [Verrucomicrobiaceae bacterium] diamond 165 106 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
28431887 28431887 PRJNA1255065_P_NODE_151066_length_162_cov_0.920354_g148838_i0 PRJNA1255065 151066 162 0.920354 1.49097348 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 85.9 7.64e-18   NR MCF7765245.1 2026799 g148838 i0 78.8 0.962962962962963 52 11 96.3 0 160 5 1253 1304 MCF7765245.1 PmoA family protein [Verrucomicrobiota bacterium] diamond 156 85.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28670856 28670856 PRJNA1255065_P_NODE_140187_length_164_cov_0.904348_g137959_i0 PRJNA1255065 140187 164 0.904348 1.48313072 Rariglobus 2706524 Bacteria Bacteria 97.4 6.97e-22   NR MBC8040811.1 2006848 g137959 i0 92.6 2.96341463414634 54 4 98.8 0 162 1 785 838 MBC8040811.1 ABC transporter permease [Opitutaceae bacterium] diamond 486 98.2 0.991853360488798 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
29176077 29176077 PRJNA1255065_P_NODE_112009_length_168_cov_0.873950_g109781_i0 PRJNA1255065 112009 168 0.87395 1.468236 Bacteria 2 Bacteria Bacteria 60.5 7.43e-9   NR MES2709612.1 2026799 g109781 i0 53.8 3.76785714285714 52 24 92.9 0 2 157 738 789 MES2709612.1 lamin tail domain-containing protein [Verrucomicrobiota bacterium] diamond 633 60.8 0.995065789473684 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29239160 29239160 PRJNA1255065_P_NODE_108229_length_169_cov_0.866667_g106001_i0 PRJNA1255065 108229 169 0.866667 1.46466723 Verrucomicrobiota 74201 Bacteria Bacteria 62.8 6.24e-10   NR MFI5337259.1 2026772 g106001 i0 84.8 1.20710059171598 33 5 58.6 0 100 2 7 39 MFI5337259.1 PIG-L deacetylase family protein [Opitutales bacterium] diamond 204 62.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales     Opitutales bacterium
29523234 29523234 PRJNA1255065_P_NODE_97830_length_176_cov_2.165354_g95602_i0 PRJNA1255065 97830 176 2.165354 3.81102304 Bacteria 2 Bacteria Bacteria 47.4 3.44e-4   NR HNX04777.1 2026772 g95602 i0 43.1 1.73863636363636 51 24 86.9 1 21 173 14 59 HNX04777.1 prepilin peptidase [Opitutales bacterium] diamond 306 47.8 0.99163179916318 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales     Opitutales bacterium
29852742 29852742 PRJNA1255065_P_NODE_114751_length_168_cov_0.873950_g112523_i0 PRJNA1255065 114751 168 0.87395 1.468236 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 61.6 3e-9   NR MBM3861874.1 2026799 g112523 i0 50.9 0.982142857142857 55 27 98.2 0 168 4 485 539 MBM3861874.1 glycosyltransferase [Verrucomicrobiota bacterium] diamond 165 61.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30010781 30010781 PRJNA1255065_P_NODE_126111_length_166_cov_0.888889_g123883_i0 PRJNA1255065 126111 166 0.888889 1.47555574 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 100 1.62e-23   NR HWB07432.1 2026801 g123883 i0 83.3 0.975903614457831 54 9 97.6 0 164 3 157 210 HWB07432.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD [Verrucomicrobiales bacterium] diamond 162 100 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
30327081 30327081 PRJNA1255065_P_NODE_117212_length_167_cov_0.881356_g114984_i0 PRJNA1255065 117212 167 0.881356 1.47186452 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 42 0.0254   NR MCU0788643.1 2026799 g114984 i0 30.6 0.880239520958084 49 33 88 1 19 165 120 167 MCU0788643.1 alpha-mannosidase [Verrucomicrobiota bacterium] diamond 147 42 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30421732 30421732 PRJNA1255065_P_NODE_105213_length_169_cov_0.866667_g102985_i0 PRJNA1255065 105213 169 0.866667 1.46466723 Opitutus sp. 1913982 Bacteria Bacteria 96.7 1.41e-21   NR MEO7597842.1 1913982 g102985 i0 92.9 5.96449704142012 56 4 99.4 0 2 169 590 645 MEO7597842.1 excinuclease ABC subunit UvrB [Opitutus sp.] diamond 1008 96.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Opitutus Opitutus sp.
30484630 30484630 PRJNA1255065_P_NODE_119053_length_167_cov_0.881356_g116825_i0 PRJNA1255065 119053 167 0.881356 1.47186452 Opitutaceae bacterium 2006848 Bacteria Bacteria 45.4 0.00149   NR HEY1793795.1 2006848 g116825 i0 41.2 0.916167664670659 51 30 91.6 0 154 2 100 150 HEY1793795.1 hypothetical protein [Opitutaceae bacterium] diamond 153 45.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
30674022 30674022 PRJNA1255065_P_NODE_94833_length_180_cov_1.190840_g92605_i0 PRJNA1255065 94833 180 1.19084 2.143512 Verrucomicrobia bacterium ADurb.Bin474 1852931 Bacteria Bacteria 71.6 3.44e-13   NR OPZ74474.1 1852931 g92605 i0 55.2 0.966666666666667 58 26 96.7 0 7 180 99 156 OPZ74474.1 MAG: hypothetical protein BWY82_00684 [Verrucomicrobia bacterium ADurb.Bin474] diamond 174 71.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobia bacterium ADurb.Bin474
30832058 30832058 PRJNA1255065_P_NODE_109394_length_169_cov_0.866667_g107166_i0 PRJNA1255065 109394 169 0.866667 1.46466723 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 76.6 3.89e-15   NR HWB03498.1 2026801 g107166 i0 72 0.887573964497041 50 14 88.8 0 5 154 199 248 HWB03498.1 hypothetical protein [Verrucomicrobiales bacterium] diamond 150 76.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
30832061 30832061 PRJNA1255065_P_NODE_120874_length_167_cov_0.881356_g118646_i0 PRJNA1255065 120874 167 0.881356 1.47186452 Opitutus sp. 1913982 Bacteria Bacteria 101 1.72e-24   NR MEO7598703.1 1913982 g118646 i0 89.1 0.988023952095808 55 6 98.8 0 165 1 23 77 MEO7598703.1 pseudouridine synthase [Opitutus sp.] diamond 165 101 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Opitutus Opitutus sp.
31053551 31053551 PRJNA1255065_P_NODE_150935_length_162_cov_0.920354_g148707_i0 PRJNA1255065 150935 162 0.920354 1.49097348 Opitutus sp. 1913982 Bacteria Bacteria 73.2 2.12e-13   NR MEO7598439.1 1913982 g148707 i0 75.5 0.981481481481482 53 13 98.1 0 2 160 127 179 MEO7598439.1 HD domain-containing phosphohydrolase [Opitutus sp.] diamond 159 73.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Opitutus Opitutus sp.
32413469 32413469 PRJNA1255065_P_NODE_144199_length_163_cov_0.912281_g141971_i0 PRJNA1255065 144199 163 0.912281 1.48701803 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 60.8 9.8e-10   NR HWB04359.1 2026801 g141971 i0 75.6 0.754601226993865 41 10 75.5 0 39 161 1 41 HWB04359.1 type VI secretion system baseplate subunit TssE [Verrucomicrobiales bacterium] diamond 123 60.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
32494753 32494753 PRJNA1255065_P_NODE_120379_length_167_cov_0.881356_g118151_i0 PRJNA1255065 120379 167 0.881356 1.47186452 Bacteria 2 Bacteria Bacteria 77.4 7.92e-15   NR MFM1768404.1 2026799 g118151 i0 67.3 3.95209580838323 55 18 98.8 0 1 165 383 437 MFM1768404.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 660 77.8 0.994858611825193 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32603053 32603053 PRJNA1255065_P_NODE_111420_length_168_cov_0.873950_g109192_i0 PRJNA1255065 111420 168 0.87395 1.468236 Terrimicrobiaceae bacterium 2832348 Bacteria Bacteria 43.5 0.00719   NR MCK9588077.1 2832348 g109192 i0 45.5 1.60714285714286 44 24 78.6 0 163 32 433 476 MCK9588077.1 hypothetical protein [Terrimicrobiaceae bacterium] diamond 270 43.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Terrimicrobiia Terrimicrobiales Terrimicrobiaceae   Terrimicrobiaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;