RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1255065" and tax_phylum = "Peploviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Peploviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1255065 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24005195 24005195 PRJNA1255065_P_NODE_16999_length_686_cov_20.728414_g8344_i4 PRJNA1255065 16999 686 20.728414 142.19692004 root 1 Root_unresolved Root_unresolved 688 0   NTclustered gi|1039754121|gb|KX165321.1| 10386 g8344 i4 85.202 97.5218658892128 669 99 98 0 9 677 26837 27505 Mutant Gallid alphaherpesvirus 1 strain GdORFC, complete genome blastn 66900 688 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Iltovirus Iltovirus gallidalpha1
29063425 29063425 PRJNA1255065_P_NODE_104728_length_169_cov_1.325000_g102500_i0 PRJNA1255065 104728 169 1.325 2.23925 Human alphaherpesvirus 1 10298 Viruses Viruses 40.8 0.00564   NR DAC85507.1 10298 g102500 i0 75 0.42603550295858 24 6 42.6 0 168 97 12 35 DAC85507.1 TPA_asm: UL22 uORF 2, partial [Human alphaherpesvirus 1] diamond 72 40.8 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Simplexvirus Simplexvirus humanalpha1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;