RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1255065", tax_phylum = "Nitrososphaerota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Nitrososphaerota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1255065 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26661988 26661988 PRJNA1255065_P_NODE_144861_length_163_cov_0.912281_g142633_i0 PRJNA1255065 144861 163 0.912281 1.48701803 Candidatus Nitrosocosmicus sp. SS 2563600 Archaea Archaea 104 3.770000000000001e-27   NR WP_149863215.1 2563600 g142633 i0 90.6 0.975460122699387 53 5 97.5 0 3 161 7 59 WP_149863215.1 hypothetical protein [Candidatus Nitrosocosmicus sp. SS] diamond 159 104 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus agrestis
29000515 29000515 PRJNA1255065_P_NODE_121548_length_167_cov_0.881356_g119320_i0 PRJNA1255065 121548 167 0.881356 1.47186452 Candidatus Nitrosocosmicus sp. SS 2563600 Archaea Archaea 99.4 6.079999999999999e-23   NR WP_149864399.1 2563600 g119320 i0 87 0.970059880239521 54 7 97 0 164 3 188 241 WP_149864399.1 glycosyltransferase [Candidatus Nitrosocosmicus sp. SS] diamond 162 99.4 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus agrestis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;