RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA1255065" and tax_phylum = "Candidatus Saccharimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA1255065 · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
360079 360079 PRJNA1255065_P_NODE_143841_length_163_cov_0.912281_g141613_i0 PRJNA1255065 143841 163 0.912281 1.48701803 Candidatus Nanosynbacter sp. BB002 3393757 Bacteria Bacteria 246 5.8099999999999995e-61   NTclustered gi|2692798772|gb|CP146064.1| 3393757 g141613 i0 93.865 2 163 10 100 0 1 163 200138 199976 Candidatus Nanosynbacter sp. BB002 chromosome, complete genome blastn 326 246 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Nanosynbacterales Candidatus Nanosynbacteraceae Candidatus Nanosynbacter Candidatus Nanosynbacter sp. BB002
14389020 14389020 PRJNA1255065_P_NODE_118452_length_167_cov_0.881356_g116224_i0 PRJNA1255065 118452 167 0.881356 1.47186452 Candidatus Minimicrobia vallesae 2841264 Bacteria Bacteria 281 1.64e-71   NTclustered gi|2052594292|gb|CP076459.1| 2841264 g116224 i0 97.006 8 167 5 100 0 1 167 160090 160256 Candidatus Minimicrobia vallesae isolate IHU2 chromosome, complete genome blastn 1336 281 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota       Candidatus Minimicrobia Candidatus Minimicrobia vallesae
20761349 20761349 PRJNA1255065_P_NODE_107477_length_169_cov_0.866667_g105249_i0 PRJNA1255065 107477 169 0.866667 1.46466723 TM7 phylum sp. oral taxon 349 713051 Bacteria Bacteria 313 5.859999999999999e-81   NTclustered gi|2028829559|gb|CP072328.1| 713051 g105249 i0 100 1 169 0 100 0 1 169 636618 636450 TM7 phylum sp. oral taxon 349 strain PM007 chromosome, complete genome blastn 169 313 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         TM7 phylum sp. oral taxon 349
29063427 29063427 PRJNA1255065_P_NODE_109208_length_169_cov_0.866667_g106980_i0 PRJNA1255065 109208 169 0.866667 1.46466723 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 102 2.2999999999999994e-24   NR MEO7617268.1 2026720 g106980 i0 81.8 0.976331360946746 55 10 97.6 0 3 167 155 209 MEO7617268.1 phenylalanine--tRNA ligase subunit alpha [Candidatus Saccharibacteria bacterium] diamond 165 102 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
29662839 29662839 PRJNA1255065_P_NODE_113370_length_168_cov_0.873950_g111142_i0 PRJNA1255065 113370 168 0.87395 1.468236 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 105 4.81e-25   NR MBB1555000.1 2026720 g111142 i0 98.2 1 56 1 100 0 168 1 320 375 MBB1555000.1 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [Candidatus Saccharibacteria bacterium] diamond 168 105 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
29820864 29820864 PRJNA1255065_P_NODE_122251_length_166_cov_1.547009_g120023_i0 PRJNA1255065 122251 166 1.547009 2.56803494 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 95.1 3.0500000000000003e-22   NR HET7629805.1 2973664 g120023 i0 77.4 3.81325301204819 53 12 95.8 0 159 1 164 216 HET7629805.1 hypothetical protein [Candidatus Saccharimonadales bacterium] diamond 633 95.1 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;