RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1255065" and tax_phylum = "Candidatus Altimarinota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Altimarinota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1255065 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29789372 29789372 PRJNA1255065_P_NODE_79811_length_201_cov_1.026316_g77583_i0 PRJNA1255065 79811 201 1.026316 2.06289516 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 48.1 1.35e-5   NR GAB0174574.1 2044595 g77583 i0 66.7 0.492537313432836 33 11 49.3 0 138 40 14 46 GAB0174574.1 MAG: hypothetical protein HHAS10_04530 [Candidatus Altimarinota bacterium] diamond 99 48.1 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
30136629 30136629 PRJNA1255065_P_NODE_137332_length_164_cov_0.904348_g135104_i0 PRJNA1255065 137332 164 0.904348 1.48313072 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 102 3.89e-25   NR MBX9808961.1 2044595 g135104 i0 75.9 0.98780487804878 54 13 98.8 0 163 2 119 172 MBX9808961.1 DUF1361 domain-containing protein [Candidatus Altimarinota bacterium] diamond 162 102 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;