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contig_metadata

21 rows where bioproject = "PRJNA1255065", tax_kingdom = "Pseudomonadati" and tax_phylum = "Myxococcota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 21 ✖

tax_kingdom 1

  • Pseudomonadati · 21 ✖

bioproject 1

  • PRJNA1255065 · 21 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4187102 4187102 PRJNA1255065_P_NODE_130064_length_165_cov_0.896552_g127836_i0 PRJNA1255065 130064 165 0.896552 1.4793108 Polyangiales bacterium 3034171 Bacteria Bacteria 101 1.67e-23   NR MET0340030.1 3034171 g127836 i0 96.3 0.981818181818182 54 2 98.2 0 164 3 195 248 MET0340030.1 hemolysin family protein [Polyangiales bacterium] diamond 162 101 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales     Polyangiales bacterium
11838906 11838906 PRJNA1255065_P_NODE_39350_length_360_cov_1.527331_g37129_i0 PRJNA1255065 39350 360 1.527331 5.4983916 Anaeromyxobacter dehalogenans 161493 Bacteria Bacteria 228 5.279999999999998e-55   NTclustered gi|219952977|gb|CP001359.1| 455488 g37129 i0 78.963 3.7 347 63 94 8 22 360 4744921 4744577 Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome blastn 1332 228 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Anaeromyxobacteraceae Anaeromyxobacter Anaeromyxobacter dehalogenans
15662775 15662775 PRJNA1255065_P_NODE_117553_length_167_cov_0.881356_g115325_i0 PRJNA1255065 117553 167 0.881356 1.47186452 Polyangium aurulentum 2567896 Bacteria Bacteria 189 1.0199999999999999e-43   NTclustered gi|2235996827|gb|CP079217.1| 2567896 g115325 i0 89.333 0.898203592814371 150 16 90 0 1 150 11622952 11623101 Polyangium aurulentum strain SDU3-1 chromosome, complete genome blastn 150 189 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Polyangium Polyangium aurulentum
16937453 16937453 PRJNA1255065_P_NODE_147974_length_162_cov_1.380531_g145746_i0 PRJNA1255065 147974 162 1.380531 2.23646022 Labilithrix luteola 1391654 Bacteria Bacteria 200 4.549999999999998e-47   NTclustered gi|913610804|gb|CP012333.1| 1391654 g145746 i0 88.889 23.5185185185185 162 18 100 0 1 162 3942195 3942034 Labilithrix luteola strain DSM 27648, complete genome blastn 3810 200 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix luteola
20179543 20179543 PRJNA1255065_P_NODE_63036_length_237_cov_1.218085_g60808_i0 PRJNA1255065 63036 237 1.218085 2.88686145 Myxococcia 32015 Bacteria Bacteria 363 8.65e-96   NTclustered gi|913610804|gb|CP012333.1| 1391654 g60808 i0 94.142 201.679324894515 239 12 100 1 1 237 3942449 3942211 Labilithrix luteola strain DSM 27648, complete genome blastn 47798 363 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix luteola
23312000 23312000 PRJNA1255065_P_NODE_109159_length_169_cov_0.866667_g106931_i0 PRJNA1255065 109159 169 0.866667 1.46466723 Labilithrix luteola 1391654 Bacteria Bacteria 200 4.76e-47   NTclustered gi|913610804|gb|CP012333.1| 1391654 g106931 i0 88.095 7.48520710059172 168 20 99 0 1 168 955563 955396 Labilithrix luteola strain DSM 27648, complete genome blastn 1265 200 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix luteola
23312019 23312019 PRJNA1255065_P_NODE_111219_length_168_cov_0.873950_g108991_i0 PRJNA1255065 111219 168 0.87395 1.468236 Labilithrix luteola 1391654 Bacteria Bacteria 172 1.04e-38   NTclustered gi|913610804|gb|CP012333.1| 1391654 g108991 i0 87.417 1.06547619047619 151 17 89 2 2 151 831279 831428 Labilithrix luteola strain DSM 27648, complete genome blastn 179 172 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix luteola
24005341 24005341 PRJNA1255065_P_NODE_53319_length_273_cov_1.620536_g51092_i0 PRJNA1255065 53319 273 1.620536 4.42406328 Nannocystis 53 Bacteria Bacteria 307 4.8400000000000005e-79   NTclustered gi|2244669|emb|X87286.1| 54 g51092 i0 87.179 125.14652014652 273 32 99 3 3 273 12 283 N.exedens 23S rRNA gene blastn 34165 307 1 Bacteria   Pseudomonadati Myxococcota   Nannocystales Nannocystaceae Nannocystis Nannocystis exedens
27136602 27136602 PRJNA1255065_P_NODE_135802_length_164_cov_0.904348_g133574_i0 PRJNA1255065 135802 164 0.904348 1.48313072 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 50.4 2.43e-5   NR MEJ2429997.1 2026735 g133574 i0 43.8 1.75609756097561 48 27 87.8 0 9 152 564 611 MEJ2429997.1 GMC family oxidoreductase [Deltaproteobacteria bacterium] diamond 288 50.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
27390075 27390075 PRJNA1255065_P_NODE_57803_length_255_cov_0.868932_g55575_i0 PRJNA1255065 57803 255 0.868932 2.2157766 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 44.3 0.0123   NR TMQ02292.1 2026735 g55575 i0 37.8 2.50588235294118 82 41 85.9 4 231 13 32 112 TMQ02292.1 MAG: FecR domain-containing protein, partial [Deltaproteobacteria bacterium] diamond 639 44.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
27863403 27863403 PRJNA1255065_P_NODE_114145_length_168_cov_0.873950_g111917_i0 PRJNA1255065 114145 168 0.87395 1.468236 Myxococcales bacterium 2026763 Bacteria Bacteria 41.6 0.0149   NR MCA9775046.1 2026763 g111917 i0 43.9 0.732142857142857 41 23 73.2 0 2 124 33 73 MCA9775046.1 hypothetical protein [Myxococcales bacterium] diamond 123 41.6 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
28210626 28210626 PRJNA1255065_P_NODE_119786_length_167_cov_0.881356_g117558_i0 PRJNA1255065 119786 167 0.881356 1.47186452 Myxococcales bacterium 2026763 Bacteria Bacteria 84 9.44e-18   NR MCA9660203.1 2026763 g117558 i0 76.5 4.77844311377245 51 12 91.6 0 13 165 97 147 MCA9660203.1 thiolase family protein [Myxococcales bacterium] diamond 798 84 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
28463585 28463585 PRJNA1255065_P_NODE_25166_length_526_cov_9.232704_g1017_i8 PRJNA1255065 25166 526 9.232704 48.56402304 Myxococcales bacterium 2026763 Bacteria Bacteria 46.2 0.0208   NR HXN81342.1 2026763 g1017 i8 31.7 0.593155893536122 104 65 58.7 3 203 511 44 142 HXN81342.1 DUF2157 domain-containing protein [Myxococcales bacterium] diamond 312 46.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
28684608 28684608 PRJNA1255065_P_NODE_131607_length_165_cov_0.896552_g129379_i0 PRJNA1255065 131607 165 0.896552 1.4793108 Archangium sp. 1872627 Bacteria Bacteria 62.4 1.54e-9   NR MFT3709871.1 1872627 g129379 i0 52.7 5.8 55 26 100 0 1 165 546 600 MFT3709871.1 ATP-binding protein [Archangium sp.] diamond 957 62.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium sp.
30010794 30010794 PRJNA1255065_P_NODE_87091_length_190_cov_1.141844_g84863_i0 PRJNA1255065 87091 190 1.141844 2.1695036 Polyangiaceae bacterium 2268199 Bacteria Bacteria 87.4 3.03e-18   NR MBK8251197.1 2268199 g84863 i0 66.1 0.978947368421053 62 21 97.9 0 2 187 368 429 MBK8251197.1 hypothetical protein [Polyangiaceae bacterium] diamond 186 87.4 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
30453210 30453210 PRJNA1255065_P_NODE_108593_length_169_cov_0.866667_g106365_i0 PRJNA1255065 108593 169 0.866667 1.46466723 Cystobacter ferrugineus 83449 Bacteria Bacteria 84.7 8.03e-20   NR WP_071900585.1 83449 g106365 i0 67.3 0.976331360946746 55 18 97.6 0 167 3 4 58 WP_071900585.1 hypothetical protein [Cystobacter ferrugineus] diamond 165 84.7 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Cystobacter Cystobacter ferrugineus
30674010 30674010 PRJNA1255065_P_NODE_111313_length_168_cov_0.873950_g109085_i0 PRJNA1255065 111313 168 0.87395 1.468236 Polyangiaceae bacterium 2268199 Bacteria Bacteria 42.4 0.0182   NR HEY5242311.1 2268199 g109085 i0 47.1 0.607142857142857 34 18 60.7 0 14 115 267 300 HEY5242311.1 hypothetical protein [Polyangiaceae bacterium] diamond 102 42.4 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
30674012 30674012 PRJNA1255065_P_NODE_128353_length_165_cov_1.560345_g126125_i0 PRJNA1255065 128353 165 1.560345 2.57456925 Polyangiales bacterium 3034171 Bacteria Bacteria 41.6 0.0328   NR MFT5359225.1 3034171 g126125 i0 42.6 0.854545454545454 47 26 83.6 1 142 5 72 118 MFT5359225.1 hypothetical protein [Polyangiales bacterium] diamond 141 41.6 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales     Polyangiales bacterium
31369629 31369629 PRJNA1255065_P_NODE_114456_length_168_cov_0.873950_g112228_i0 PRJNA1255065 114456 168 0.87395 1.468236 Polyangiaceae bacterium 2268199 Bacteria Bacteria 90.5 2.07e-19   NR MEZ4314835.1 2268199 g112228 i0 78.6 2.94642857142857 56 12 100 0 1 168 15 70 MEZ4314835.1 serine/threonine-protein kinase [Polyangiaceae bacterium] diamond 495 90.5 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
31685545 31685545 PRJNA1255065_P_NODE_148537_length_162_cov_0.920354_g146309_i0 PRJNA1255065 148537 162 0.920354 1.49097348 Myxococcota bacterium 2818507 Bacteria Bacteria 40.8 0.041   NR MEE2644298.1 2818507 g146309 i0 52.4 0.777777777777778 42 17 77.8 1 36 161 7 45 MEE2644298.1 hypothetical protein [Myxococcota bacterium] diamond 126 40.8 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
31735063 31735063 PRJNA1255065_P_NODE_107417_length_169_cov_0.866667_g105189_i0 PRJNA1255065 107417 169 0.866667 1.46466723 Pseudomonadati 3379134 Bacteria Bacteria 70.9 1.59e-12   NR MEO6598261.1 2268199 g105189 i0 64.6 1.79289940828402 48 17 85.2 0 12 155 430 477 MEO6598261.1 FAD/NAD(P)-binding protein [Polyangiaceae bacterium] diamond 303 71.6 0.990223463687151 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;