RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1255065", tax_kingdom = "Fungi" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 4 ✖

tax_kingdom 1

  • Fungi · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1255065 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2911132 2911132 PRJNA1255065_P_NODE_53723_length_271_cov_1.873874_g51496_i0 PRJNA1255065 53723 271 1.873874 5.07819854 Microsporidia sp. 1984797 Fungi Fungi 250 8.21e-62   NTclustered gi|2126689602|gb|OL312656.1| 1984797 g51496 i0 83.696 96.9778597785978 276 33 99 10 3 271 3 273 Microsporidia sp. isolate Micro3 small subunit ribosomal RNA gene, partial sequence blastn 26281 250 1 Eukaryota Opisthokonta Fungi Microsporidia         Microsporidia sp.
11256562 11256562 PRJNA1255065_P_NODE_35649_length_394_cov_1.881159_g33428_i0 PRJNA1255065 35649 394 1.881159 7.41176646 Fungi 4751 Fungi Fungi 183 1.28e-41   NTclustered gi|1378896647|gb|MF278562.1| 1485682 g33428 i0 95.652 30.550761421319802 115 4 29 1 230 344 5537 5650 Mitosporidium daphniae strain UGP3 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 12037 183 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae
22036488 22036488 PRJNA1255065_P_NODE_111518_length_168_cov_0.873950_g109290_i0 PRJNA1255065 111518 168 0.87395 1.468236 Encephalitozoon romaleae 571949 Fungi Fungi 95.3 2.31e-15   NTclustered gi|210076707|gb|FJ026013.1| 571949 g109290 i0 79.333 0.892857142857143 150 20 84 9 10 150 465 612 Encephalitozoon sp. SJ-2008 16S small subunit ribosomal RNA gene, partial sequence; 16S-23S internal transcribed spacer, complete sequence; and 23S large subunit ribosomal RNA gene, partial sequence blastn 150 95.3 1 Eukaryota Opisthokonta Fungi Microsporidia     Unikaryonidae Encephalitozoon Encephalitozoon romaleae
22730102 22730102 PRJNA1255065_P_NODE_33098_length_422_cov_1.109920_g30879_i0 PRJNA1255065 33098 422 1.10992 4.6838624 Encephalitozoon 6033 Fungi Fungi 281 4.76e-71   NTclustered gi|1253338741|ref|XR_002670131.1| 876142 g30879 i0 79.021 9.94075829383886 429 76 100 11 1 422 1110 689 Encephalitozoon intestinalis ATCC 50506 5.8S-23S ribosomal RNA (Eint_010010), rRNA blastn 4195 281 1 Eukaryota Opisthokonta Fungi Microsporidia     Unikaryonidae Encephalitozoon Encephalitozoon intestinalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;