contig_metadata
7 rows where bioproject = "PRJNA1255065", tax_kingdom = "Bacillati" and tax_phylum = "Mycoplasmatota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13806627 | 13806627 | PRJNA1255065_P_NODE_151751_length_162_cov_0.920354_g149523_i0 | PRJNA1255065 | 151751 | 162 | 0.920354 | 1.49097348 | root | 1 | Root_unresolved | Root_unresolved | 52.8 | 0.013 | NTclustered | gi|2639800476|gb|CP141041.1| | 171284 | g149523 | i0 | 100 | 0.401234567901235 | 28 | 0 | 17 | 0 | 16 | 43 | 688385 | 688358 | Mycoplasmopsis cynos strain 94662 chromosome | blastn | 65 | 52.8 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mycoplasmopsis | Mycoplasmopsis cynos | |||
| 16937116 | 16937116 | PRJNA1255065_P_NODE_114134_length_168_cov_0.873950_g111906_i0 | PRJNA1255065 | 114134 | 168 | 0.87395 | 1.468236 | Spiroplasma culicicola | 216935 | Bacteria | Bacteria | 52.8 | 0.014 | NTclustered | gi|583840421|gb|CP006681.1| | 1276246 | g111906 | i0 | 100 | 0.166666666666667 | 28 | 0 | 17 | 0 | 117 | 144 | 480339 | 480312 | Spiroplasma culicicola AES-1, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Entomoplasmatales | Spiroplasmataceae | Spiroplasma | Spiroplasma culicicola | ||
| 16937743 | 16937743 | PRJNA1255065_P_NODE_62334_length_239_cov_1.894737_g60106_i0 | PRJNA1255065 | 62334 | 239 | 1.894737 | 4.52842143 | Spiroplasma endosymbiont of Aspidapion aeneum | 3066276 | Bacteria | Bacteria | 132 | 2.68e-26 | NTclustered | gi|2719904881|emb|OZ034994.1| | 3066276 | g60106 | i0 | 86.667 | 157.790794979079 | 120 | 14 | 50 | 2 | 120 | 238 | 943829 | 943947 | Spiroplasma endosymbiont of Aspidapion aeneum isolate 54746 genome assembly, chromosome: 1 | blastn | 37712 | 132 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Entomoplasmatales | Spiroplasmataceae | Spiroplasma | Spiroplasma endosymbiont of Aspidapion aeneum | ||
| 27516194 | 27516194 | PRJNA1255065_P_NODE_7263_length_1063_cov_49.628205_g5990_i1 | PRJNA1255065 | 7263 | 1063 | 49.628205 | 527.54781915 | Mycoplasmopsis anatis | 171279 | Bacteria | Bacteria | 115 | 3.72e-27 | NR | MBW0597145.1 | 171279 | g5990 | i1 | 68 | 0.640639698965193 | 97 | 31 | 27.4 | 0 | 550 | 840 | 62 | 158 | MBW0597145.1 hypothetical protein [Mycoplasmopsis anatis] | diamond | 681 | 115 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mycoplasmopsis | Mycoplasmopsis anatis | |||
| 29189764 | 29189764 | PRJNA1255065_P_NODE_121729_length_167_cov_0.813559_g119501_i0 | PRJNA1255065 | 121729 | 167 | 0.813559 | 1.35864353 | Mycoplasmopsis arginini | 2094 | Bacteria | Bacteria | 45.8 | 2e-4 | NR | MDI3350086.1 | 2094 | g119501 | i0 | 76 | 0.449101796407186 | 25 | 6 | 44.9 | 0 | 164 | 90 | 71 | 95 | MDI3350086.1 hypothetical protein [Mycoplasmopsis arginini] | diamond | 75 | 45.8 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mycoplasmopsis | Mycoplasmopsis arginini | |||
| 30737180 | 30737180 | PRJNA1255065_P_NODE_122654_length_166_cov_1.247863_g120426_i0 | PRJNA1255065 | 122654 | 166 | 1.247863 | 2.07145258 | Mycoplasmopsis arginini | 2094 | Bacteria | Bacteria | 45.4 | 0.00122 | NR | MDI3350303.1 | 2094 | g120426 | i0 | 85.7 | 0.379518072289157 | 21 | 3 | 38 | 0 | 88 | 26 | 4 | 24 | MDI3350303.1 hypothetical protein [Mycoplasmopsis arginini] | diamond | 63 | 45.4 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mycoplasmopsis | Mycoplasmopsis arginini | |||
| 31685541 | 31685541 | PRJNA1255065_P_NODE_128117_length_165_cov_1.793103_g125889_i0 | PRJNA1255065 | 128117 | 165 | 1.793103 | 2.95861995 | Mycoplasmopsis arginini | 2094 | Bacteria | Bacteria | 40.4 | 0.0246 | NR | MDI3350086.1 | 2094 | g125889 | i0 | 72.7 | 0.4 | 22 | 6 | 40 | 0 | 3 | 68 | 74 | 95 | MDI3350086.1 hypothetical protein [Mycoplasmopsis arginini] | diamond | 66 | 40.4 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mycoplasmopsis | Mycoplasmopsis arginini |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;