RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1255065", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 4 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 4 ✖

bioproject 1

  • PRJNA1255065 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27958231 27958231 PRJNA1255065_P_NODE_143205_length_163_cov_0.912281_g140977_i0 PRJNA1255065 143205 163 0.912281 1.48701803 Ignavibacteria bacterium 2053306 Bacteria Bacteria 64.3 3.09e-10   NR MBK6878853.1 2053306 g140977 i0 96.7 3.31288343558282 30 1 55.2 0 2 91 510 539 MBK6878853.1 hypothetical protein [Ignavibacteria bacterium] diamond 540 64.3 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
30390191 30390191 PRJNA1255065_P_NODE_152353_length_162_cov_0.920354_g150125_i0 PRJNA1255065 152353 162 0.920354 1.49097348 Ignavibacteria bacterium 2053306 Bacteria Bacteria 55.1 3.39e-7   NR MBE2228126.1 2053306 g150125 i0 100 0.481481481481481 26 0 48.1 0 84 161 1 26 MBE2228126.1 hypothetical protein [Ignavibacteria bacterium] diamond 78 55.1 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
32665921 32665921 PRJNA1255065_P_NODE_132640_length_165_cov_0.896552_g130412_i0 PRJNA1255065 132640 165 0.896552 1.4793108 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 105 2.63e-25   NR HOP49201.1 2049428 g130412 i0 96.3 0.981818181818182 54 2 98.2 0 164 3 275 328 HOP49201.1 glycosyltransferase [Ignavibacteriales bacterium] diamond 162 105 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium
32665922 32665922 PRJNA1255065_P_NODE_139500_length_164_cov_0.904348_g137272_i0 PRJNA1255065 139500 164 0.904348 1.48313072 Ignavibacteria bacterium 2053306 Bacteria Bacteria 63.2 7.93e-10   NR HMQ69540.1 2053306 g137272 i0 61.4 1.04268292682927 57 18 97 1 159 1 233 289 HMQ69540.1 hypothetical protein [Ignavibacteria bacterium] diamond 171 63.2 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;