contig_metadata
4 rows where bioproject = "PRJNA1253698" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 359526 | 359526 | PRJNA1253698_S_NODE_12121_length_200_cov_1.026490_g11755_i0 | PRJNA1253698 | 12121 | 200 | 1.02649 | 2.05298 | Congregicoccus parvus | 3081749 | Bacteria | Bacteria | 368 | 1.52e-97 | NTclustered | gi|2599616993|dbj|AP028972.1| | 3081749 | g11755 | i0 | 100 | 119.575 | 199 | 0 | 99 | 0 | 2 | 200 | 1304862 | 1304664 | Opitutales bacterium ASA1 DNA, complete genome | blastn | 23915 | 368 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Alterococcaceae | Congregicoccus | Congregicoccus parvus | |
| 1634425 | 1634425 | PRJNA1253698_S_NODE_17802_length_169_cov_1.275000_g17436_i0 | PRJNA1253698 | 17802 | 169 | 1.275 | 2.15475 | Opitutus sp. VeGlc2 | 134634 | Bacteria | Bacteria | 272 | 9.95e-69 | NTclustered | gi|164510706|emb|AJ966885.1| | 134634 | g17436 | i0 | 95.833 | 15.0769230769231 | 168 | 7 | 99 | 0 | 1 | 168 | 2253 | 2420 | Opitutus sp. VeGlc2 16S rRNA gene (partial), 23S rRNA gene, tRNA-Ala gene, tRNA-Ile gene, ITS1 and ITS2, strain DSM 11246 | blastn | 2548 | 272 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. VeGlc2 | |
| 19485668 | 19485668 | PRJNA1253698_S_NODE_17296_length_171_cov_1.262295_g16930_i0 | PRJNA1253698 | 17296 | 171 | 1.262295 | 2.15852445 | Opitutus sp. VeGlc2 | 134634 | Bacteria | Bacteria | 274 | 2.8099999999999996e-69 | NTclustered | gi|164510706|emb|AJ966885.1| | 134634 | g16930 | i0 | 95.858 | 168.654970760234 | 169 | 7 | 99 | 0 | 2 | 170 | 2681 | 2513 | Opitutus sp. VeGlc2 16S rRNA gene (partial), 23S rRNA gene, tRNA-Ala gene, tRNA-Ile gene, ITS1 and ITS2, strain DSM 11246 | blastn | 28840 | 274 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. VeGlc2 | |
| 30453208 | 30453208 | PRJNA1253698_S_NODE_3873_length_354_cov_0.934426_g3507_i0 | PRJNA1253698 | 3873 | 354 | 0.934426 | 3.30786804 | Verrucomicrobium sp. 3C | 1134055 | Bacteria | Bacteria | 41.6 | 0.0491 | NR | WP_018290946.1 | 1134055 | g3507 | i0 | 35.7 | 0.711864406779661 | 84 | 49 | 71.2 | 2 | 341 | 90 | 3 | 81 | WP_018290946.1 hypothetical protein [Verrucomicrobium sp. 3C] | diamond | 252 | 41.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobium | Verrucomicrobium sp. 3C |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;