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contig_metadata

4 rows where bioproject = "PRJNA1253698" and tax_clade = "Sar"

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analysis 2

tax_superkingdom 1

tax_clade 1

bioproject 1

  • PRJNA1253698 · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10563728 10563728 PRJNA1253698_S_NODE_13069_length_193_cov_1.569444_g12703_i0 PRJNA1253698 13069 193 1.569444 3.02902692 Sundstroemia setigera 3005 SAR_Eukaryotes SAR_Eukaryotes 91.6 3.53e-14   NTclustered gi|2172620428|ref|NC_059919.1| 3005 g12703 i0 86.585 4.67357512953368 82 11 42 0 37 118 25935 26016 Rhizosolenia setigera isolate CNS00456 mitochondrion, complete genome blastn 902 91.6 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Rhizosoleniales Rhizosoleniaceae Sundstroemia Sundstroemia setigera
13806200 13806200 PRJNA1253698_S_NODE_24651_length_151_cov_24.980392_g24285_i0 PRJNA1253698 24651 151 24.980392 37.72039192 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 261 1.88e-65   NTclustered gi|56117723|gb|AY822609.1| 2945 g24285 i0 98.013 141.019867549669 151 2 99 1 2 151 1243 1093 Prorocentrum micans large subunit ribosomal RNA gene, complete sequence blastn 21294 261 1 Eukaryota Sar     Dinophyceae Prorocentrales Prorocentraceae Prorocentrum Prorocentrum micans
22036339 22036339 PRJNA1253698_S_NODE_23198_length_162_cov_1.106195_g22832_i0 PRJNA1253698 23198 162 1.106195 1.7920359 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 274 2.64e-69   NTclustered gi|820695469|tpe|LN714488.1| 572307 g22832 i0 97.5 4.7962962962963 160 4 99 0 1 160 117745 117586 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 777 274 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
32051578 32051578 PRJNA1253698_S_NODE_20398_length_166_cov_0.888889_g20032_i0 PRJNA1253698 20398 166 0.888889 1.47555574 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 87.8 1.52e-19   NR KAF4719464.1 32597 g20032 i0 70.9 6.95783132530121 55 16 99.4 0 166 2 61 115 KAF4719464.1 Cystathionine, partial [Perkinsus olseni] diamond 1155 88.6 0.99097065462754 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;