contig_metadata
7 rows where bioproject = "PRJNA1253698", tax_clade = "PVC group" and tax_phylum = "Chlamydiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 359580 | 359580 | PRJNA1253698_S_NODE_3241_length_388_cov_2.097345_g2876_i0 | PRJNA1253698 | 3241 | 388 | 2.097345 | 8.1376986 | Candidatus Protochlamydia naegleriophila | 389348 | Bacteria | Bacteria | 438 | 2.429999999999999e-118 | NTclustered | gi|971146634|emb|LN879502.1| | 389348 | g2876 | i0 | 88.714 | 78.4072164948454 | 381 | 13 | 98 | 15 | 7 | 386 | 1250514 | 1250163 | Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK | blastn | 30422 | 438 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila | |
| 3603164 | 3603164 | PRJNA1253698_S_NODE_11943_length_201_cov_1.539474_g11577_i0 | PRJNA1253698 | 11943 | 201 | 1.539474 | 3.09434274 | Parachlamydia | 83551 | Bacteria | Bacteria | 311 | 2.61e-80 | NTclustered | gi|470491594|ref|NR_077046.1| | 83552 | g11577 | i0 | 94.949 | 114.248756218905 | 198 | 10 | 99 | 0 | 1 | 198 | 1106 | 909 | Parachlamydia acanthamoebae strain UV-7 23S ribosomal RNA gene, complete sequence | blastn | 22964 | 311 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydia | Parachlamydia acanthamoebae | |
| 9287890 | 9287890 | PRJNA1253698_S_NODE_4448_length_330_cov_1.217082_g4082_i0 | PRJNA1253698 | 4448 | 330 | 1.217082 | 4.0163706 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 453 | 7.29e-123 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g4082 | i0 | 91.541 | 138.981818181818 | 331 | 24 | 99 | 4 | 1 | 329 | 2061045 | 2060717 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 45864 | 453 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 11838277 | 11838277 | PRJNA1253698_S_NODE_17110_length_172_cov_1.186992_g16744_i0 | PRJNA1253698 | 17110 | 172 | 1.186992 | 2.04162624 | uncultured Chlamydiales bacterium | 174324 | Bacteria | Bacteria | 283 | 4.700000000000002e-72 | NTclustered | gi|880804243|gb|KT262987.1| | 174324 | g16744 | i0 | 97.024 | 91.5174418604651 | 168 | 5 | 98 | 0 | 2 | 169 | 168 | 1 | Uncultured Chlamydiales bacterium clone SW2A 16S ribosomal RNA gene, partial sequence | blastn | 15741 | 283 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | uncultured Chlamydiales bacterium | |||
| 15662553 | 15662553 | PRJNA1253698_S_NODE_18313_length_168_cov_1.949580_g17947_i0 | PRJNA1253698 | 18313 | 168 | 1.94958 | 3.2752944 | Neochlamydia hartmannellae | 112235 | Bacteria | Bacteria | 272 | 9.95e-69 | NTclustered | gi|219857449|ref|NR_025037.1| | 112235 | g17947 | i0 | 100 | 97.5952380952381 | 147 | 0 | 88 | 0 | 1 | 147 | 279 | 425 | Neochlamydia hartmannellae strain A1Hsp 16S ribosomal RNA, partial sequence | blastn | 16396 | 272 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Neochlamydia | Neochlamydia hartmannellae | |
| 19485740 | 19485740 | PRJNA1253698_S_NODE_9716_length_221_cov_1.087209_g9350_i0 | PRJNA1253698 | 9716 | 221 | 1.087209 | 2.40273189 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 298 | 2.28e-76 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g9350 | i0 | 90.991 | 108.995475113122 | 222 | 18 | 100 | 2 | 1 | 221 | 2060160 | 2060380 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 24088 | 298 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 20761213 | 20761213 | PRJNA1253698_S_NODE_14757_length_183_cov_1.604478_g14391_i0 | PRJNA1253698 | 14757 | 183 | 1.604478 | 2.93619474 | Waddlia malaysiensis | 219016 | Bacteria | Bacteria | 167 | 5.33e-37 | NTclustered | gi|27903501|gb|AY184804.1| | 219016 | g14391 | i0 | 83.616 | 135.415300546448 | 177 | 27 | 96 | 2 | 5 | 180 | 2073 | 2248 | Waddlia sp. G817 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 24781 | 167 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Waddliaceae | Waddlia | Waddlia malaysiensis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;