RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1253303", tax_kingdom = "Metazoa" and tax_phylum = "Nemertea"

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tax_superkingdom 1

tax_phylum 1

  • Nemertea · 1 ✖

tax_kingdom 1

  • Metazoa · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA1253303 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5462713 5462713 PRJNA1253303_P_NODE_1425_length_419_cov_1.352601_g1403_i0 PRJNA1253303 1425 419 1.352601 5.66739819 Metazoa 33208 Nemertea other_Eukaryota 161 8.829999999999998e-48   NR ABZ04218.1 56195 g1403 i0 61.5 14.4200477326969 135 52 96.7 0 414 10 1 135 ABZ04218.1 ribosomal protein rpl5, partial [Lineus viridis] diamond 6042 162 0.993827160493827 Eukaryota Opisthokonta Metazoa Nemertea Pilidiophora Heteronemertea Lineidae Lineus Lineus viridis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;