RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1253303", tax_kingdom = "Metazoa" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1253303 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9287596 9287596 PRJNA1253303_P_NODE_2668_length_325_cov_2.166667_g2646_i0 PRJNA1253303 2668 325 2.166667 7.04166775 Rhizocaulus verticillatus 314511 Cnidaria other_Eukaryota 270 7.74e-68   NTclustered gi|62825415|gb|AY789844.1| 314511 g2646 i0 83.986 65.8 281 45 86 0 35 315 1 281 Rhizocaulus verticillatus voucher 820AS calmodulin gene, partial cds blastn 21385 270 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Campanulariidae Rhizocaulus Rhizocaulus verticillatus
28368578 28368578 PRJNA1253303_P_NODE_3546_length_291_cov_1.073394_g3524_i0 PRJNA1253303 3546 291 1.073394 3.12357654 Acropora millepora 45264 Cnidaria other_Eukaryota 127 9.21e-33   NR XP_029192128.2 45264 g3524 i0 61.1 3.91752577319588 95 36 97.9 1 286 2 162 255 XP_029192128.2 lysosomal aspartic protease-like [Acropora millepora] diamond 1140 127 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora millepora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;