RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1253303", tax_kingdom = "Metazoa" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1253303 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31843718 31843718 PRJNA1253303_P_NODE_3757_length_284_cov_1.402844_g3735_i0 PRJNA1253303 3757 284 1.402844 3.98407696 Owenia fusiformis 6347 Annelida Annelida 45.1 0.00877   NR CAH1778661.1 6347 g3735 i0 28.7 3.16901408450704 101 55 97.2 3 278 3 154 246 CAH1778661.1 unnamed protein product, partial [Owenia fusiformis] diamond 900 45.1 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
32463010 32463010 PRJNA1253303_P_NODE_8459_length_242_cov_0.923077_g8437_i0 PRJNA1253303 8459 242 0.923077 2.23384634 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 107 3.63e-25   NR KAK2190321.1 27915 g8437 i0 62.5 15.3471074380165 80 30 99.2 0 1 240 296 375 KAK2190321.1 hypothetical protein NP493_84g01013 [Ridgeia piscesae] diamond 3714 108 0.990740740740741 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Ridgeia Ridgeia piscesae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;