contig_metadata
8 rows where bioproject = "PRJNA1253303" and tax_clade = "core chlorophytes"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9287564 | 9287564 | PRJNA1253303_P_NODE_1188_length_452_cov_1.440633_g1166_i0 | PRJNA1253303 | 1188 | 452 | 1.440633 | 6.51166116 | Coccomyxa | 41891 | Plants | Plants | 251 | 4.4799999999999996e-82 | NR | CAL5221060.1 | 1274662 | g1166 | i0 | 80.8 | 15.4048672566372 | 146 | 28 | 96.9 | 0 | 14 | 451 | 1 | 146 | CAL5221060.1 g3183 [Coccomyxa viridis] | diamond | 6963 | 251 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Coccomyxaceae | Coccomyxa | Coccomyxa viridis | ||
| 23311655 | 23311655 | PRJNA1253303_P_NODE_3999_length_277_cov_1.455882_g3977_i0 | PRJNA1253303 | 3999 | 277 | 1.455882 | 4.03279314 | Scherffelia dubia | 3190 | Plants | Plants | 209 | 1.43e-49 | NTclustered | gi|13897311|emb|AJ312020.1| | 3190 | g3977 | i0 | 81.569 | 72.3068592057762 | 255 | 45 | 92 | 2 | 7 | 260 | 1442 | 1189 | Scherffelia dubia partial mRNA for luminal binding protein (bip gene), strain SAG 40.89 | blastn | 20029 | 209 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorodendrophyceae | Chlorodendrales | Chlorodendraceae | Scherffelia | Scherffelia dubia | |
| 28070776 | 28070776 | PRJNA1253303_P_NODE_8105_length_243_cov_0.917647_g8083_i0 | PRJNA1253303 | 8105 | 243 | 0.917647 | 2.22988221 | Chlamydomonadales | 3042 | Plants | Plants | 75.9 | 1.12e-15 | NR | KAG2437468.1 | 51695 | g8083 | i0 | 55 | 1.48148148148148 | 60 | 27 | 74.1 | 0 | 11 | 190 | 34 | 93 | KAG2437468.1 hypothetical protein HXX76_006118 [Chlamydomonas incerta] | diamond | 360 | 76.6 | 0.990861618798956 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas incerta | |
| 28558259 | 28558259 | PRJNA1253303_P_NODE_4807_length_255_cov_1.285714_g4785_i0 | PRJNA1253303 | 4807 | 255 | 1.285714 | 3.2785707 | Haematococcus lacustris | 44745 | Plants | Plants | 89 | 2.34e-18 | NR | KAJ9515451.1 | 44745 | g4785 | i0 | 63.2 | 1.55294117647059 | 68 | 25 | 80 | 0 | 245 | 42 | 859 | 926 | KAJ9515451.1 hypothetical protein QJQ45_016447 [Haematococcus lacustris] | diamond | 396 | 89 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Haematococcaceae | Haematococcus | Haematococcus lacustris | |
| 28968649 | 28968649 | PRJNA1253303_P_NODE_1408_length_421_cov_0.887931_g1386_i0 | PRJNA1253303 | 1408 | 421 | 0.887931 | 3.73818951 | Bryopsis sp. KO-2 | 3115439 | Plants | Plants | 48.5 | 0.00254 | NR | GMH46045.1 | 3041901 | g1386 | i0 | 37.4 | 1.53919239904988 | 99 | 42 | 66.3 | 6 | 73 | 351 | 1378 | 1462 | GMH46045.1 hypothetical protein BSKO_14009 [Bryopsis sp. KO-2023] | diamond | 648 | 48.5 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Ulvophyceae | Bryopsidales | Bryopsidaceae | Bryopsis | Bryopsis sp. KO-2023 | |
| 29410523 | 29410523 | PRJNA1253303_P_NODE_8429_length_242_cov_0.923077_g8407_i0 | PRJNA1253303 | 8429 | 242 | 0.923077 | 2.23384634 | Ostreobium quekettii | 121088 | Plants | Plants | 102 | 1.49e-23 | NR | CAD7701840.1 | 121088 | g8407 | i0 | 87.7 | 0.706611570247934 | 57 | 7 | 70.7 | 0 | 242 | 72 | 322 | 378 | CAD7701840.1 unnamed protein product [Ostreobium quekettii] | diamond | 171 | 102 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Ulvophyceae | Bryopsidales | Ostreobiaceae | Ostreobium | Ostreobium quekettii | |
| 31274461 | 31274461 | PRJNA1253303_P_NODE_5995_length_250_cov_0.881356_g5973_i0 | PRJNA1253303 | 5995 | 250 | 0.881356 | 2.20339 | Raphidocelis subcapitata | 307507 | Plants | Plants | 117 | 3.0899999999999993e-31 | NR | GBF93448.1 | 307507 | g5973 | i0 | 68.3 | 0.984 | 82 | 26 | 98.4 | 0 | 5 | 250 | 36 | 117 | GBF93448.1 ribosomal protein S1 [Raphidocelis subcapitata] | diamond | 246 | 117 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Selenastraceae | Raphidocelis | Raphidocelis subcapitata | |
| 31559370 | 31559370 | PRJNA1253303_P_NODE_476_length_684_cov_1.333879_g454_i0 | PRJNA1253303 | 476 | 684 | 1.333879 | 9.12373236 | Trebouxia sp. A1-2 | 2608996 | Plants | Plants | 243 | 1.55e-70 | NR | KAA6427849.1 | 2608996 | g454 | i0 | 62 | 1.75438596491228 | 200 | 76 | 87.7 | 0 | 683 | 84 | 869 | 1068 | KAA6427849.1 MAG: elongation factor 3 [Trebouxia sp. A1-2] | diamond | 1200 | 243 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Trebouxiales | Trebouxiaceae | Trebouxia | Trebouxia sp. A1-2 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;