RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1253303", tax_clade = "Opisthokonta" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA1253303 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6737184 6737184 PRJNA1253303_P_NODE_4346_length_267_cov_1.376289_g4324_i0 PRJNA1253303 4346 267 1.376289 3.67469163 Basidiobolus meristosporus CBS 931.73 1314790 Fungi Fungi 135 1.2499999999999999e-34   NR ORY06296.1 1314790 g4324 i0 70.5 1.97752808988764 88 26 98.9 0 266 3 234 321 ORY06296.1 hypothetical protein K493DRAFT_252011 [Basidiobolus meristosporus CBS 931.73] diamond 528 135 1 Eukaryota Opisthokonta Fungi Zoopagomycota Basidiobolomycetes Basidiobolales Basidiobolaceae Basidiobolus Basidiobolus meristosporus
31260791 31260791 PRJNA1253303_P_NODE_4995_length_253_cov_0.866667_g4973_i0 PRJNA1253303 4995 253 0.866667 2.19266751 Eukaryota 2759 Fungi Fungi 80.5 2.22e-15   NR KAJ2861537.1 417176 g4973 i0 48.7 9.3201581027668 76 39 90.1 0 247 20 166 241 KAJ2861537.1 coatomer subunit beta [Coemansia aciculifera] diamond 2358 81.3 0.990159901599016 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Coemansia Coemansia aciculifera
32886226 32886226 PRJNA1253303_P_NODE_6860_length_247_cov_0.896552_g6838_i0 PRJNA1253303 6860 247 0.896552 2.21448344 Basidiobolus ranarum 34480 Fungi Fungi 70.1 6.29e-13   NR KAK9696832.1 34480 g6838 i0 73.5 0.595141700404858 49 13 59.5 0 3 149 103 151 KAK9696832.1 60S ribosomal protein L11, partial [Basidiobolus ranarum] diamond 147 70.1 1 Eukaryota Opisthokonta Fungi Zoopagomycota Basidiobolomycetes Basidiobolales Basidiobolaceae Basidiobolus Basidiobolus ranarum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;