RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1249535" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1249535 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26978780 26978780 PRJNA1249535_S_NODE_273002_length_267_cov_4.788660_g269619_i0 PRJNA1249535 273002 267 4.78866 12.7857222 Balneolales bacterium 2497613 Bacteria Bacteria 48.5 1.95e-4   NR MCG8374751.1 2497613 g269619 i0 32.4 0.831460674157303 74 50 83.1 0 265 44 57 130 MCG8374751.1 hypothetical protein [Balneolales bacterium] diamond 222 48.5 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales     Balneolales bacterium
27547691 27547691 PRJNA1249535_S_NODE_330884_length_233_cov_3.750000_g327501_i0 PRJNA1249535 330884 233 3.75 8.7375 Balneolaceae bacterium 2053516 Bacteria Bacteria 42.4 0.0448   NR MDX1587137.1 2053516 g327501 i0 34.7 0.630901287553648 49 32 63.1 0 220 74 245 293 MDX1587137.1 MMPL family transporter [Balneolaceae bacterium] diamond 147 42.4 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium
32318750 32318750 PRJNA1249535_S_NODE_90359_length_386_cov_4.415335_g86977_i0 PRJNA1249535 90359 386 4.415335 17.0431931 Balneola sp. 2024824 Bacteria Bacteria 45.8 0.0127   NR MFV1883626.1 2024824 g86977 i0 35.5 0.481865284974093 62 37 45.9 1 284 108 43 104 MFV1883626.1 stage II sporulation protein M [Balneola sp.] diamond 186 45.8 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Balneola Balneola sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;