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contig_metadata

19 rows where bioproject = "PRJNA1249535" and tax_phylum = "Acidobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 19 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1249535 · 19 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
357026 357026 PRJNA1249535_S_NODE_260301_length_274_cov_3.815920_g256918_i0 PRJNA1249535 260301 274 3.81592 10.4556208 Sulfidibacter corallicola 2818388 Bacteria Bacteria 54.7 0.007   NTclustered gi|2013124720|gb|CP071793.1| 2818388 g256918 i0 100 0.105839416058394 29 0 11 0 226 254 534362 534390 Sulfidibacter corallicola strain M133 chromosome, complete genome blastn 29 54.7 1 Bacteria   Pseudomonadati Acidobacteriota Holophagae Acanthopleuribacterales Acanthopleuribacteraceae Sulfidibacter Sulfidibacter corallicola
15660073 15660073 PRJNA1249535_S_NODE_263753_length_272_cov_4.477387_g260370_i0 PRJNA1249535 263753 272 4.477387 12.17849264 uncultured Acidobacteriaceae bacterium 194844 Bacteria Bacteria 52.8 0.025   NTclustered gi|2874253980|emb|OY970305.1| 194844 g260370 i0 100 0.102941176470588 28 0 10 0 33 60 1766496 1766523 MAG: uncultured Acidobacteriaceae bacterium isolate MFD03726.bin.c.10 genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   uncultured Acidobacteriaceae bacterium
27105139 27105139 PRJNA1249535_S_NODE_169802_length_323_cov_2.956000_g166419_i0 PRJNA1249535 169802 323 2.956 9.54788 Holophagaceae bacterium 2052165 Bacteria Bacteria 87.8 5.84e-19   NR HJV89547.1 2052165 g166419 i0 44.8 0.975232198142415 105 56 97.5 1 1 315 68 170 HJV89547.1 ATP-dependent Clp endopeptidase proteolytic subunit ClpP [Holophagaceae bacterium] diamond 315 87.8 1 Bacteria   Pseudomonadati Acidobacteriota Holophagae Holophagales Holophagaceae   Holophagaceae bacterium
27547673 27547673 PRJNA1249535_S_NODE_283324_length_262_cov_1.693122_g279941_i0 PRJNA1249535 283324 262 1.693122 4.43597964 Acidobacteriota bacterium 1978231 Bacteria Bacteria 42.7 0.0473   NR MEM8998310.1 1978231 g279941 i0 30.6 0.709923664122137 62 43 71 0 68 253 532 593 MEM8998310.1 penicillin acylase family protein [Acidobacteriota bacterium] diamond 186 42.7 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27579151 27579151 PRJNA1249535_S_NODE_126104_length_351_cov_14.863309_g122721_i0 PRJNA1249535 126104 351 14.863309 52.17021459 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 41.6 0.0433   NR GIU80903.1 2212468 g122721 i0 38.8 0.572649572649573 67 36 54.7 2 327 136 5 69 GIU80903.1 MAG: hypothetical protein KatS3mg005_4141 [Bryobacteraceae bacterium] diamond 201 41.6 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
28337018 28337018 PRJNA1249535_S_NODE_175966_length_319_cov_5.199187_g172583_i0 PRJNA1249535 175966 319 5.199187 16.58540653 Acidobacteriota bacterium 1978231 Bacteria Bacteria 45.1 0.0142   NR MEP7012518.1 1978231 g172583 i0 36.5 0.695924764890282 74 45 68.7 2 273 55 302 374 MEP7012518.1 tetratricopeptide repeat protein [Acidobacteriota bacterium] diamond 222 45.1 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28400186 28400186 PRJNA1249535_S_NODE_288646_length_259_cov_1.827957_g285263_i0 PRJNA1249535 288646 259 1.827957 4.73440863 Acidobacteriota bacterium 1978231 Bacteria Bacteria 43.9 0.0166   NR MCI0408320.1 1978231 g285263 i0 40.9 1.52895752895753 66 27 66 2 84 254 99 161 MCI0408320.1 pyridine nucleotide-disulfide oxidoreductase [Acidobacteriota bacterium] diamond 396 43.9 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28936999 28936999 PRJNA1249535_S_NODE_205068_length_303_cov_5.586957_g201685_i0 PRJNA1249535 205068 303 5.586957 16.92847971 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 42 0.0492   NR HLI83616.1 2212468 g201685 i0 54.8 0.306930693069307 31 14 30.7 0 134 42 66 96 HLI83616.1 hypothetical protein [Bryobacteraceae bacterium] diamond 93 42 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
29031911 29031911 PRJNA1249535_S_NODE_308048_length_248_cov_4.948571_g304665_i0 PRJNA1249535 308048 248 4.948571 12.27245608 Acidobacteriota bacterium 1978231 Bacteria Bacteria 40 0.0499   NR MDQ6786973.1 1978231 g304665 i0 39 0.713709677419355 59 29 62.9 1 223 68 1 59 MDQ6786973.1 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase [Acidobacteriota bacterium] diamond 177 40 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29189682 29189682 PRJNA1249535_S_NODE_260109_length_274_cov_4.517413_g256726_i0 PRJNA1249535 260109 274 4.517413 12.37771162 Acidobacteriota bacterium 1978231 Bacteria Bacteria 43.1 0.0392   NR MBI3950142.1 1978231 g256726 i0 31.9 0.788321167883212 72 44 77.7 2 243 31 128 195 MBI3950142.1 glutamate--tRNA ligase [Acidobacteriota bacterium] diamond 216 43.1 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29315842 29315842 PRJNA1249535_S_NODE_327969_length_236_cov_2.595092_g324586_i0 PRJNA1249535 327969 236 2.595092 6.12441712 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 42.4 0.0466   NR HMB51991.1 2651171 g324586 i0 43.5 0.584745762711864 46 24 55.9 1 13 144 74 119 HMB51991.1 multiheme c-type cytochrome [Thermoanaerobaculia bacterium] diamond 138 42.4 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
29978984 29978984 PRJNA1249535_S_NODE_315631_length_244_cov_6.233918_g312248_i0 PRJNA1249535 315631 244 6.233918 15.21075992 Blastocatellia bacterium 2052146 Bacteria Bacteria 42 0.0368   NR HEX5084671.1 2052146 g312248 i0 37.7 0.651639344262295 53 33 65.2 0 162 4 1 53 HEX5084671.1 beta-L-arabinofuranosidase domain-containing protein [Blastocatellia bacterium] diamond 159 42 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia       Blastocatellia bacterium
30831912 30831912 PRJNA1249535_S_NODE_150374_length_335_cov_2.740458_g146991_i0 PRJNA1249535 150374 335 2.740458 9.1805343 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 43.5 0.0376   NR HEY6121378.1 2283092 g146991 i0 34.3 0.6 67 38 60 2 69 269 82 142 HEY6121378.1 hypothetical protein [Pyrinomonadaceae bacterium] diamond 201 43.5 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
31432473 31432473 PRJNA1249535_S_NODE_112296_length_363_cov_3.034483_g108913_i0 PRJNA1249535 112296 363 3.034483 11.01517329 Acidobacteriota bacterium 1978231 Bacteria Bacteria 95.1 6.57e-20   NR MCY3929922.1 1978231 g108913 i0 53.2 1.30578512396694 79 37 65.3 0 126 362 500 578 MCY3929922.1 reverse transcriptase domain-containing protein [Acidobacteriota bacterium] diamond 474 95.1 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32223468 32223468 PRJNA1249535_S_NODE_158198_length_330_cov_2.754864_g154815_i0 PRJNA1249535 158198 330 2.754864 9.0910512 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 46.2 0.00553   NR MCM3869231.1 2283092 g154815 i0 30.3 1.38181818181818 76 45 63.6 3 60 269 129 202 MCM3869231.1 Fic family protein [Pyrinomonadaceae bacterium] diamond 456 46.2 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
32445180 32445180 PRJNA1249535_S_NODE_313299_length_246_cov_1.352601_g309916_i0 PRJNA1249535 313299 246 1.352601 3.32739846 Acidobacteriota bacterium 1978231 Bacteria Bacteria 45.8 0.00318   NR RPJ63142.1 1978231 g309916 i0 31.1 1.80487804878049 74 51 90.2 0 234 13 216 289 RPJ63142.1 MAG: phospholipid carrier-dependent glycosyltransferase, partial [Acidobacteriota bacterium] diamond 444 45.8 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32634202 32634202 PRJNA1249535_S_NODE_330180_length_234_cov_2.552795_g326797_i0 PRJNA1249535 330180 234 2.552795 5.9735403 Acidobacteriota bacterium 1978231 Bacteria Bacteria 42.7 0.0323   NR MBV9210182.1 1978231 g326797 i0 43.5 0.58974358974359 46 26 59 0 74 211 213 258 MBV9210182.1 glycosyltransferase family 39 protein [Acidobacteriota bacterium] diamond 138 42.7 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32715295 32715295 PRJNA1249535_S_NODE_156160_length_331_cov_3.844961_g152777_i0 PRJNA1249535 156160 331 3.844961 12.72682091 Pseudomonadati 3379134 Bacteria Bacteria 97.4 1.09e-22   NR OFW37905.1 1797188 g152777 i0 47.2 10.785498489426 106 49 93.4 3 317 9 43 144 OFW37905.1 MAG: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Acidobacteria bacterium RIFCSPLOWO2_12_FULL_60_22] diamond 3570 98.2 0.991853360488798 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteria bacterium RIFCSPLOWO2_12_FULL_60_22
32854744 32854744 PRJNA1249535_S_NODE_201700_length_305_cov_3.887931_g198317_i0 PRJNA1249535 201700 305 3.887931 11.85818955 Acidobacteriota bacterium 1978231 Bacteria Bacteria 43.5 0.038   NR MBM3784234.1 1978231 g198317 i0 51 0.481967213114754 49 24 48.2 0 269 123 148 196 MBM3784234.1 DUF3500 domain-containing protein [Acidobacteriota bacterium] diamond 147 43.5 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;