contig_metadata
8 rows where bioproject = "PRJNA1249535", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3602931 | 3602931 | PRJNA1249535_S_NODE_171243_length_322_cov_3.638554_g167860_i0 | PRJNA1249535 | 171243 | 322 | 3.638554 | 11.71614388 | Bacteriovorax | 146784 | Bacteria | Bacteria | 52.8 | 0.03 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g167860 | i0 | 96.774 | 0.183229813664596 | 31 | 1 | 10 | 0 | 44 | 74 | 501129 | 501159 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 59 | 52.8 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 8009585 | 8009585 | PRJNA1249535_S_NODE_182367_length_316_cov_2.246914_g178984_i0 | PRJNA1249535 | 182367 | 316 | 2.246914 | 7.10024824 | Bdellovibrio bacteriovorus | 959 | Bacteria | Bacteria | 315 | 3.42e-81 | NTclustered | gi|2800948966|gb|CP168973.1| | 959 | g178984 | i0 | 85.174 | 181.863924050633 | 317 | 36 | 98 | 9 | 7 | 316 | 1676519 | 1676831 | Bdellovibrio bacteriovorus strain HK2 chromosome, complete genome | blastn | 57469 | 315 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 16935285 | 16935285 | PRJNA1249535_S_NODE_341134_length_216_cov_5.538462_g337751_i0 | PRJNA1249535 | 341134 | 216 | 5.538462 | 11.96307792 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 52.8 | 0.019 | NTclustered | gi|2626289182|emb|OY843585.1| | 2053517 | g337751 | i0 | 100 | 0.12962962962963 | 28 | 0 | 13 | 0 | 83 | 110 | 298341 | 298368 | MAG: Bdellovibrionales bacterium isolate 022bb5af-5c53-4953-82b0-2ef8059d9f16 genome assembly, chromosome: 1 | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 18209348 | 18209348 | PRJNA1249535_S_NODE_305595_length_250_cov_1.096045_g302212_i0 | PRJNA1249535 | 305595 | 250 | 1.096045 | 2.7401125 | Bdellovibrio bacteriovorus | 959 | Bacteria | Bacteria | 52.8 | 0.023 | NTclustered | gi|2800920897|gb|CP168968.1| | 959 | g302212 | i0 | 100 | 0.112 | 28 | 0 | 11 | 0 | 202 | 229 | 3034565 | 3034538 | Bdellovibrio bacteriovorus strain Bd5 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 27199916 | 27199916 | PRJNA1249535_S_NODE_21282_length_645_cov_13.690559_g18179_i0 | PRJNA1249535 | 21282 | 645 | 13.690559 | 88.30410555 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 47 | 0.0334 | NR | MBT6325452.1 | 2053517 | g18179 | i0 | 27.4 | 0.493023255813954 | 106 | 71 | 46.5 | 2 | 257 | 556 | 94 | 199 | MBT6325452.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [Bdellovibrionales bacterium] | diamond | 318 | 47 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 28337061 | 28337061 | PRJNA1249535_S_NODE_254706_length_277_cov_4.137255_g251323_i0 | PRJNA1249535 | 254706 | 277 | 4.137255 | 11.46019635 | Pigmentibacter ruber | 2683196 | Bacteria | Bacteria | 43.9 | 0.023 | NR | WP_158996909.1 | 2683196 | g251323 | i0 | 31 | 0.768953068592058 | 71 | 48 | 75.8 | 1 | 243 | 34 | 396 | 466 | WP_158996909.1 protein kinase domain-containing protein [Pigmentibacter ruber] | diamond | 213 | 43.9 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Silvanigrellales | Silvanigrellaceae | Pigmentibacter | Pigmentibacter ruber | ||
| 29189639 | 29189639 | PRJNA1249535_S_NODE_143589_length_339_cov_4.500000_g140206_i0 | PRJNA1249535 | 143589 | 339 | 4.5 | 15.255 | Bdellovibrionales bacterium | 2053517 | Bacteria | Bacteria | 43.5 | 0.0427 | NR | MBU6152860.1 | 2053517 | g140206 | i0 | 32 | 0.663716814159292 | 75 | 42 | 59.3 | 2 | 36 | 236 | 64 | 137 | MBU6152860.1 thioredoxin-dependent thiol peroxidase [Bdellovibrionales bacterium] | diamond | 225 | 43.5 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Bdellovibrionales bacterium | ||||
| 32065181 | 32065181 | PRJNA1249535_S_NODE_267458_length_270_cov_5.035533_g264075_i0 | PRJNA1249535 | 267458 | 270 | 5.035533 | 13.5959391 | Fluviispira vulneris | 2763012 | Bacteria | Bacteria | 44.7 | 0.00609 | NR | WP_186648911.1 | 2763012 | g264075 | i0 | 40 | 0.555555555555556 | 50 | 30 | 55.6 | 0 | 245 | 96 | 92 | 141 | WP_186648911.1 GNAT family N-acetyltransferase [Fluviispira vulneris] | diamond | 150 | 44.7 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Silvanigrellales | Silvanigrellaceae | Fluviispira | Fluviispira vulneris |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;