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contig_metadata

5 rows where bioproject = "PRJNA1249535", tax_kingdom = "Methanobacteriati" and tax_phylum = "Thermoplasmatota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 5 ✖

tax_kingdom 1

  • Methanobacteriati · 5 ✖

bioproject 1

  • PRJNA1249535 · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14384403 14384403 PRJNA1249535_S_NODE_122432_length_354_cov_7.711744_g119049_i0 PRJNA1249535 122432 354 7.711744 27.29957376 Thermoplasmata archaeon 1906666 Archaea Archaea 52.8 0.033   NTclustered gi|2108430933|gb|CP070629.1| 1906666 g119049 i0 100 0.0790960451977401 28 0 8 0 308 335 888303 888276 MAG: Thermoplasmata archaeon isolate bin983 chromosome blastn 28 52.8 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
20760537 20760537 PRJNA1249535_S_NODE_79137_length_403_cov_1.415152_g75756_i0 PRJNA1249535 79137 403 1.415152 5.70306256 Ferroplasma acidiphilum 74969 Archaea Archaea 52.8 0.039   NTclustered gi|2573967612|gb|CP133600.1| 74969 g75756 i0 100 0.0694789081885856 28 0 7 0 167 194 274902 274875 MAG: Ferroplasma acidiphilum isolate BR_01 chromosome, complete genome blastn 28 52.8 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Thermoplasmatales Ferroplasmaceae Ferroplasma Ferroplasma acidiphilum
29031841 29031841 PRJNA1249535_S_NODE_152148_length_334_cov_1.984674_g148765_i0 PRJNA1249535 152148 334 1.984674 6.62881116 Thermoplasmatota archaeon 2806419 Archaea Archaea 45.8 0.00914   NR MEE8565855.1 2806419 g148765 i0 50 0.323353293413174 36 17 32.3 1 301 194 1190 1224 MEE8565855.1 hypothetical protein [Thermoplasmatota archaeon] diamond 108 45.8 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
30231731 30231731 PRJNA1249535_S_NODE_301852_length_252_cov_0.871508_g298469_i0 PRJNA1249535 301852 252 0.871508 2.19620016 Thermoplasmata archaeon 1906666 Archaea Archaea 42.7 0.00741   NR MCK5773661.1 1906666 g298469 i0 35.5 0.738095238095238 62 36 72.6 2 190 8 5 63 MCK5773661.1 50S ribosomal protein L37Ae [Thermoplasmata archaeon] diamond 186 42.7 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
30295297 30295297 PRJNA1249535_S_NODE_229192_length_291_cov_2.119266_g225809_i0 PRJNA1249535 229192 291 2.119266 6.16706406 Thermoplasmata archaeon 1906666 Archaea Archaea 43.1 0.031   NR UCF07645.1 1906666 g225809 i0 53.3 0.309278350515464 30 14 30.9 0 225 136 57 86 UCF07645.1 MAG: GTP-binding protein [Thermoplasmata archaeon] diamond 90 43.1 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;