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contig_metadata

9 rows where bioproject = "PRJNA1249535" and tax_clade = "Stenosarchaea group"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 9 ✖

bioproject 1

  • PRJNA1249535 · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4184901 4184901 PRJNA1249535_S_NODE_313664_length_245_cov_7.139535_g310281_i0 PRJNA1249535 313664 245 7.139535 17.49186075 Methanosalsum zhilinae 39669 Archaea Archaea 56.5 0.002   NTclustered gi|335929340|gb|CP002101.1| 679901 g310281 i0 100 0.122448979591837 30 0 12 0 98 127 1665167 1665138 Methanosalsum zhilinae DSM 4017, complete genome blastn 30 56.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosalsum Methanosalsum zhilinae
11255809 11255809 PRJNA1249535_S_NODE_58369_length_450_cov_10.732095_g55003_i0 PRJNA1249535 58369 450 10.732095 48.2944275 Methanosarcina 2207 Archaea Archaea 56.5 0.003   NTclustered gi|1111741292|dbj|AP017646.1| 2210 g55003 i0 100 0.266666666666667 30 0 7 0 268 297 2444796 2444825 Methanosarcina thermophila DNA, complete genome, strain: MT-1 blastn 120 56.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina thermophila
15080046 15080046 PRJNA1249535_S_NODE_161952_length_328_cov_0.945098_g158569_i0 PRJNA1249535 161952 328 0.945098 3.09992144 Methanosarcina 2207 Archaea Archaea 52.8 0.031   NTclustered gi|805354519|gb|CP009508.1| 1434118 g158569 i0 100 0.25609756097561 28 0 9 0 76 103 2456182 2456209 Methanosarcina siciliae C2J, complete genome blastn 84 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina siciliae
19482290 19482290 PRJNA1249535_S_NODE_188136_length_313_cov_1.300000_g184753_i0 PRJNA1249535 188136 313 1.3 4.069 Methanosarcina barkeri 2208 Archaea Archaea 52.8 0.029   NTclustered gi|805384997|gb|CP009517.1| 1434107 g184753 i0 100 0.0894568690095847 28 0 9 0 128 155 4491270 4491297 Methanosarcina barkeri 3, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina barkeri
20757158 20757158 PRJNA1249535_S_NODE_144977_length_338_cov_4.898113_g141594_i0 PRJNA1249535 144977 338 4.898113 16.55562194 Methanogenium organophilum 2199 Archaea Archaea 52.8 0.032   NTclustered gi|2388587735|gb|CP113361.1| 2199 g141594 i0 100 0.0828402366863905 28 0 8 0 151 178 1216724 1216751 Methanogenium organophilum strain DSM 3596 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanogenium Methanogenium organophilum
23310884 23310884 PRJNA1249535_S_NODE_60339_length_445_cov_1.940860_g56970_i0 PRJNA1249535 60339 445 1.94086 8.636827 Methanosarcina sp. MTP4 1434100 Archaea Archaea 54.7 0.012   NTclustered gi|805342629|gb|CP009505.1| 1434100 g56970 i0 96.875 0.0719101123595506 32 1 7 0 156 187 1786294 1786263 Methanosarcina sp. MTP4, complete genome blastn 32 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp. MTP4
27376492 27376492 PRJNA1249535_S_NODE_332083_length_232_cov_3.100629_g328700_i0 PRJNA1249535 332083 232 3.100629 7.19345928 Haloferax 2251 Archaea Archaea 42.4 0.0447   NR WP_004970558.1 35745 g328700 i0 33.3 2.68965517241379 69 32 71.1 1 168 4 242 310 WP_004970558.1 L-lactate permease [Haloferax denitrificans] diamond 624 42.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloferax Haloferax denitrificans
30105247 30105247 PRJNA1249535_S_NODE_290932_length_257_cov_11.391304_g287549_i0 PRJNA1249535 290932 257 11.391304 29.27565128 Halobacteriales archaeon SW_9_67_25 1919210 Archaea Archaea 41.2 0.0251   NR PSQ59589.1 1919210 g287549 i0 30.9 0.642023346303502 55 38 64.2 0 239 75 7 61 PSQ59589.1 MAG: hypothetical protein BRD23_04035 [Halobacteriales archaeon SW_9_67_25] diamond 165 41.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales     Halobacteriales archaeon SW_9_67_25
32413452 32413452 PRJNA1249535_S_NODE_76179_length_408_cov_2.322388_g72798_i0 PRJNA1249535 76179 408 2.322388 9.47534304 uncultured Methanomethylovorans sp. 183759 Archaea Archaea 45.8 0.0169   NR WP_321416730.1 183759 g72798 i0 36.4 0.485294117647059 66 38 45.6 1 31 216 371 436 WP_321416730.1 RNA-guided endonuclease InsQ/TnpB family protein [uncultured Methanomethylovorans sp.] diamond 198 45.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanomethylovorans uncultured Methanomethylovorans sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;