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contig_metadata

7 rows where bioproject = "PRJNA1249535", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 7 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 7 ✖

bioproject 1

  • PRJNA1249535 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1633363 1633363 PRJNA1249535_S_NODE_55882_length_458_cov_4.550649_g52521_i0 PRJNA1249535 55882 458 4.550649 20.84197242 Ignavibacteria bacterium 2053306 Bacteria Bacteria 52.8 0.044   NTclustered gi|1858604176|gb|CP054675.1| 2053306 g52521 i0 100 0.0611353711790393 28 0 6 0 319 346 2294337 2294310 Ignavibacteria bacterium isolate Ch128a chromosome, complete genome blastn 28 52.8 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
1634013 1634013 PRJNA1249535_S_NODE_94022_length_381_cov_16.574675_g90640_i0 PRJNA1249535 94022 381 16.574675 63.14951175 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 58.4 7.81e-4   NTclustered gi|1850839647|gb|CP053446.1| 2026749 g90640 i0 100 0.0813648293963255 31 0 8 0 18 48 1400399 1400429 Ignavibacteriae bacterium isolate IGN2 chromosome blastn 31 58.4 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium
11834225 11834225 PRJNA1249535_S_NODE_141350_length_341_cov_2.037313_g137967_i0 PRJNA1249535 141350 341 2.037313 6.94723733 Ignavibacterium album 591197 Bacteria Bacteria 52.8 0.032   NTclustered gi|383800634|gb|CP003418.1| 945713 g137967 i0 100 0.0821114369501466 28 0 8 0 14 41 2358365 2358392 Ignavibacterium album JCM 16511, complete genome blastn 28 52.8 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae Ignavibacterium Ignavibacterium album
20759257 20759257 PRJNA1249535_S_NODE_307537_length_249_cov_1.329545_g304154_i0 PRJNA1249535 307537 249 1.329545 3.31056705 uncultured Ignavibacteriales bacterium 1191687 Bacteria Bacteria 52.8 0.023   NTclustered gi|2874253946|emb|OY970271.1| 1191687 g304154 i0 100 0.112449799196787 28 0 11 0 180 207 2762809 2762836 MAG: uncultured Ignavibacteriales bacterium isolate MFD02416.bin.c.14 genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     uncultured Ignavibacteriales bacterium
26725085 26725085 PRJNA1249535_S_NODE_172021_length_322_cov_1.566265_g168638_i0 PRJNA1249535 172021 322 1.566265 5.0433733 Ignavibacteria bacterium 2053306 Bacteria Bacteria 60.8 1.54e-8   NR KAF0139660.1 2053306 g168638 i0 35.8 5.87888198757764 109 61 97.8 4 5 319 43 146 KAF0139660.1 MAG: hypothetical protein FD143_3553 [Ignavibacteria bacterium] diamond 1893 60.8 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
29505217 29505217 PRJNA1249535_S_NODE_84190_length_395_cov_2.009317_g80808_i0 PRJNA1249535 84190 395 2.009317 7.93680215 Ignavibacterium sp. 2651167 Bacteria Bacteria 44.3 0.0335   NR WP_297837130.1 2651167 g80808 i0 40 0.493670886075949 65 30 43.3 2 362 192 122 185 WP_297837130.1 class I SAM-dependent methyltransferase [Ignavibacterium sp.] diamond 195 44.3 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae Ignavibacterium Ignavibacterium sp.
30327065 30327065 PRJNA1249535_S_NODE_87432_length_390_cov_3.738170_g84050_i0 PRJNA1249535 87432 390 3.73817 14.578863 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 47 0.00309   NR MFH1204673.1 2026749 g84050 i0 36.1 1.10769230769231 72 40 50.8 1 240 43 6 77 MFH1204673.1 hypothetical protein [Ignavibacteriota bacterium] diamond 432 47 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;