RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1249535", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA1249535 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28007829 28007829 PRJNA1249535_S_NODE_175165_length_320_cov_2.582996_g171782_i0 PRJNA1249535 175165 320 2.582996 8.2655872 Candidatus Nanosynbacter 2093823 Bacteria Bacteria 43.5 0.0327   NR QHU92775.1 713059 g171782 i0 44.7 0.7125 38 21 35.6 0 278 165 2 39 QHU92775.1 hypothetical protein GWK77_01105 [Candidatus Saccharibacteria bacterium oral taxon 488] diamond 228 43.5 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium oral taxon 488
31748717 31748717 PRJNA1249535_S_NODE_192197_length_310_cov_4.827004_g188814_i0 PRJNA1249535 192197 310 4.827004 14.9637124 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 43.1 0.0423   NR MBQ3320973.1 2026720 g188814 i0 37 0.706451612903226 73 45 69.7 1 280 65 107 179 MBQ3320973.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 219 43.1 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
31938525 31938525 PRJNA1249535_S_NODE_243657_length_283_cov_3.242857_g240274_i0 PRJNA1249535 243657 283 3.242857 9.17728531 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 77.4 1.45e-14   NR MCA9346951.1 2026720 g240274 i0 48.6 1.57950530035336 74 38 78.4 0 25 246 26 99 MCA9346951.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 447 77.4 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
32697306 32697306 PRJNA1249535_S_NODE_30660_length_570_cov_5.233400_g27417_i0 PRJNA1249535 30660 570 5.2334 29.83038 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 88.6 2.16e-17   NR MCA9346951.1 2026720 g27417 i0 46.1 0.468421052631579 89 48 46.8 0 468 202 22 110 MCA9346951.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 267 88.6 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;