RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1249042", tax_kingdom = "Fungi" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1249042 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20756019 20756019 PRJNA1249042_S_NODE_39197_length_225_cov_2.582418_g38983_i0 PRJNA1249042 39197 225 2.582418 5.8104405 root 1 Root_unresolved Root_unresolved 116 3.53e-28   NR KAI8325172.1 61414 g38983 i0 76.7 41.8933333333333 73 17 97.3 0 224 6 160 232 KAI8325172.1 hsp71-like protein [Martensiomyces pterosporus] diamond 9426 117 0.991452991452991 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Martensiomyces Martensiomyces pterosporus
30800208 30800208 PRJNA1249042_S_NODE_70794_length_186_cov_4.132867_g70580_i0 PRJNA1249042 70794 186 4.132867 7.68713262 Thamnocephalis sphaerospora 78915 Fungi Fungi 50.4 3.25e-5   NR RKP06644.1 78915 g70580 i0 95.8 0.758064516129032 24 1 38.7 0 102 173 25 48 RKP06644.1 T-complex protein 1 subunit beta [Thamnocephalis sphaerospora] diamond 141 50.4 1 Eukaryota Opisthokonta Fungi Zoopagomycota Zoopagomycetes Zoopagales Sigmoideomycetaceae Thamnocephalis Thamnocephalis sphaerospora
32589532 32589532 PRJNA1249042_S_NODE_34539_length_233_cov_1.952632_g34325_i0 PRJNA1249042 34539 233 1.952632 4.54963256 Coemansia 4863 Fungi Fungi 43.5 0.0182   NR KAI9470362.1 4864 g34325 i0 40.4 4.01716738197425 52 31 67 0 38 193 2416 2467 KAI9470362.1 armadillo-type protein [Coemansia mojavensis] diamond 936 43.5 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Coemansia Coemansia mojavensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;