RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA1249042", tax_kingdom = "Fungi" and tax_phylum = "Microsporidia"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA1249042 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20755810 20755810 PRJNA1249042_S_NODE_17457_length_272_cov_3.414847_g17243_i0 PRJNA1249042 17457 272 3.414847 9.28838384 Vairimorpha necatrix 6039 Fungi Fungi 54.7 0.007   NTclustered gi|2735582072|ref|XM_065472247.1| 6039 g17243 i0 100 0.106617647058824 29 0 11 0 117 145 335 307 Vairimorpha necatrix diphosphoinositol polyphosphate phosphohydrolase 1 (VNE69_01113), partial mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vairimorpha Vairimorpha necatrix
22030860 22030860 PRJNA1249042_S_NODE_105138_length_157_cov_19.701754_g104924_i0 PRJNA1249042 105138 157 19.701754 30.93175378 Vairimorpha necatrix 6039 Fungi Fungi 58.4 2.78e-4   NTclustered gi|2735582564|ref|XM_065472493.1| 6039 g104924 i0 94.737 0.24203821656051 38 0 23 2 98 133 128 91 Vairimorpha necatrix uncharacterized protein (VNE69_01357), partial mRNA blastn 38 58.4 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vairimorpha Vairimorpha necatrix
30515971 30515971 PRJNA1249042_S_NODE_42193_length_221_cov_1.039326_g41979_i0 PRJNA1249042 42193 221 1.039326 2.29691046 Vairimorpha apis BRL 35231 Fungi Fungi 42.7 0.0258   NR EQB60402.1 1037528 g41979 i0 33.3 0.97737556561086 72 46 95 1 219 10 104 175 EQB60402.1 hypothetical protein NAPIS_ORF02044 [Vairimorpha apis BRL 01] diamond 216 42.7 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vairimorpha Vairimorpha apis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;