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contig_metadata

11 rows where bioproject = "PRJNA1249042", tax_kingdom = "Bacillati" and tax_phylum = "Chloroflexota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 11 ✖

tax_kingdom 1

  • Bacillati · 11 ✖

bioproject 1

  • PRJNA1249042 · 11 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4181302 4181302 PRJNA1249042_S_NODE_103424_length_159_cov_1.241379_g103210_i0 PRJNA1249042 103424 159 1.241379 1.97379261 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 124 2.75e-24   NTclustered gi|2874254062|emb|OY970386.1| 1672391 g103210 i0 82.979 95.9056603773585 141 21 87 3 1 139 1891727 1891866 MAG: uncultured Chloroflexia bacterium isolate MFD03726.bin.c.14 genome assembly, chromosome: 1 blastn 15249 124 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
15657116 15657116 PRJNA1249042_S_NODE_109833_length_154_cov_2.954955_g109619_i0 PRJNA1249042 109833 154 2.954955 4.5506307 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 156 9.359999999999999e-34   NTclustered gi|2874254132|emb|OY970217.1| 1672391 g109619 i0 88.976 116.331168831169 127 12 82 2 29 154 3522619 3522494 MAG: uncultured Chloroflexia bacterium isolate MFD05684.bin.1.130 genome assembly, chromosome: 1 blastn 17915 156 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
15657733 15657733 PRJNA1249042_S_NODE_86273_length_172_cov_2.581395_g86059_i0 PRJNA1249042 86273 172 2.581395 4.4399994 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 65.8 1.85e-6   NTclustered gi|2621704001|emb|OY762956.1| 2026734 g86059 i0 95.238 0.488372093023256 42 1 24 1 132 172 1512772 1512731 MAG: Dehalococcoidia bacterium isolate caf6cba7-c187-4a53-abc2-184ab5dfaca7 genome assembly, chromosome: 1 blastn 84 65.8 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
22031198 22031198 PRJNA1249042_S_NODE_3838_length_445_cov_6.783582_g3626_i0 PRJNA1249042 3838 445 6.783582 30.1869399 Roseiflexus sp. RS-1 357808 Bacteria Bacteria 366 1.3499999999999996e-96   NTclustered gi|470481958|ref|NR_076505.1| 357808 g3626 i0 82.529 139.955056179775 435 58 96 18 18 445 1281 858 Roseiflexus sp. RS-1 strain RS-1 23S ribosomal RNA, complete sequence blastn 62280 366 1 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales Roseiflexaceae Roseiflexus Roseiflexus sp. RS-1
22031448 22031448 PRJNA1249042_S_NODE_66018_length_191_cov_4.486486_g65804_i0 PRJNA1249042 66018 191 4.486486 8.56918826 Phototrophicaceae bacterium 3069543 Bacteria Bacteria 196 7.17e-46   NTclustered gi|2893356046|emb|OZ220469.1| 3069543 g65804 i0 85.417 227.03664921466 192 25 100 3 1 191 2202982 2202793 MAG: Phototrophicaceae bacterium isolate 149760b3-584d-4ebc-81cd-1236e649b30c genome assembly, chromosome: 1 blastn 43364 196 1 Bacteria   Bacillati Chloroflexota Candidatus Thermofontia Phototrophicales Phototrophicaceae   Phototrophicaceae bacterium
24581033 24581033 PRJNA1249042_S_NODE_6220_length_356_cov_2.469649_g6006_i0 PRJNA1249042 6220 356 2.469649 8.79195044 Candidatus Chlorohelix allophototropha 3003348 Bacteria Bacteria 388 2.26e-103   NTclustered gi|2530750984|gb|CP128400.1| 3003348 g6006 i0 86.723 866.634831460674 354 41 100 5 4 356 320832 320484 Candidatus Chlorohelix allophototropha isolate L227-S17 chromosome 2, complete sequence blastn 308522 388 1 Bacteria   Bacillati Chloroflexota Chloroflexia Candidatus Chloroheliales Candidatus Chloroheliaceae Candidatus Chlorohelix Candidatus Chlorohelix allophototropha
29410366 29410366 PRJNA1249042_S_NODE_47549_length_213_cov_2.358824_g47335_i0 PRJNA1249042 47549 213 2.358824 5.02429512 Chloroflexota bacterium 2026724 Bacteria Bacteria 42.7 0.0249   NR MCE9645369.1 2026724 g47335 i0 44.4 0.507042253521127 36 20 50.7 0 32 139 351 386 MCE9645369.1 M1 family metallopeptidase [Chloroflexota bacterium] diamond 108 42.7 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
29694275 29694275 PRJNA1249042_S_NODE_16830_length_275_cov_1.418103_g16616_i0 PRJNA1249042 16830 275 1.418103 3.89978325 Anaerolineales bacterium 2073117 Bacteria Bacteria 43.5 0.0298   NR MCC6191996.1 2073117 g16616 i0 50 0.610909090909091 56 26 60 2 170 6 727 781 MCC6191996.1 GAF domain-containing protein [Anaerolineales bacterium] diamond 168 43.5 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
31053391 31053391 PRJNA1249042_S_NODE_106815_length_156_cov_2.955752_g106601_i0 PRJNA1249042 106815 156 2.955752 4.61097312 Chloroflexota bacterium 2026724 Bacteria Bacteria 41.2 0.0401   NR NLG28053.1 2026724 g106601 i0 41.5 0.788461538461538 41 24 78.8 0 130 8 297 337 NLG28053.1 DNRLRE domain-containing protein [Chloroflexota bacterium] diamond 123 41.2 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
32413329 32413329 PRJNA1249042_S_NODE_105539_length_157_cov_2.473684_g105325_i0 PRJNA1249042 105539 157 2.473684 3.88368388 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 80.9 2.89e-16   NR MBX7112445.1 2026734 g105325 i0 73.9 0.878980891719745 46 12 87.9 0 3 140 64 109 MBX7112445.1 MaoC family dehydratase N-terminal domain-containing protein [Dehalococcoidia bacterium] diamond 138 80.9 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
32571628 32571628 PRJNA1249042_S_NODE_78759_length_179_cov_1.727941_g78545_i0 PRJNA1249042 78759 179 1.727941 3.09301439 Dehalococcoidales bacterium 2026733 Bacteria Bacteria 59.7 6.7e-9   NR MDD5702901.1 2026733 g78545 i0 63 0.770949720670391 46 17 77.1 0 178 41 120 165 MDD5702901.1 DUF4125 family protein [Dehalococcoidales bacterium] diamond 138 59.7 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia Dehalococcoidales     Dehalococcoidales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;