RNAquarium Metadata Server
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contig_metadata

10 rows where bioproject = "PRJNA1249042", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 10 ✖

tax_clade 1

  • Sar · 10 ✖

bioproject 1

  • PRJNA1249042 · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9282698 9282698 PRJNA1249042_S_NODE_37848_length_227_cov_2.875000_g37634_i0 PRJNA1249042 37848 227 2.875 6.52625 Plasmodium cynomolgi 5827 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.006   NTclustered gi|457875988|ref|XM_004224447.1| 1120755 g37634 i0 100 0.127753303964758 29 0 13 0 82 110 651 679 Plasmodium cynomolgi strain B protein kinase (PCYB_134220) mRNA, complete cds blastn 29 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium cynomolgi
13108732 13108732 PRJNA1249042_S_NODE_87951_length_171_cov_1.468750_g87737_i0 PRJNA1249042 87951 171 1.46875 2.5115625 Gregarina niphandrodes 110365 SAR_Eukaryotes SAR_Eukaryotes 73.1 1.1e-8   NTclustered gi|749157478|ref|XM_011132066.1| 110365 g87737 i0 95.556 0.467836257309941 45 2 27 0 113 157 165 209 Gregarina niphandrodes hypothetical protein partial mRNA blastn 80 73.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Gregarinidae Gregarina Gregarina niphandrodes
15657307 15657307 PRJNA1249042_S_NODE_28553_length_244_cov_2.572139_g28339_i0 PRJNA1249042 28553 244 2.572139 6.27601916 Plasmodium relictum 85471 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.006   NTclustered gi|1620139505|ref|XM_028675465.1| 85471 g28339 i0 100 0.118852459016393 29 0 12 0 200 228 1581 1609 Plasmodium relictum conserved Plasmodium protein, unknown function (PRELSG_0601800), partial mRNA blastn 29 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium relictum
16931756 16931756 PRJNA1249042_S_NODE_45514_length_216_cov_1.901734_g45300_i0 PRJNA1249042 45514 216 1.901734 4.10774544 Plasmodium vinckei 5860 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.019   NTclustered gi|1931716671|ref|XM_037634662.1| 54757 g45300 i0 100 0.12962962962963 28 0 13 0 55 82 8287 8260 Plasmodium vinckei vinckei conserved Plasmodium protein, unknown function (PVVCY_1202710), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium vinckei
18206063 18206063 PRJNA1249042_S_NODE_24855_length_252_cov_2.339713_g24641_i0 PRJNA1249042 24855 252 2.339713 5.89607676 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 368 2e-97   NTclustered gi|1624698160|ref|XM_029013948.1| 189622 g24641 i0 93.227 684.694444444444 251 16 99 1 1 251 23 272 Babesia ovata zinc finger protein 33B (BOVATA_050310), partial mRNA blastn 172543 368 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
22031268 22031268 PRJNA1249042_S_NODE_45538_length_216_cov_1.832370_g45324_i0 PRJNA1249042 45538 216 1.83237 3.9579192 Plasmodium gallinaceum 5849 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.019   NTclustered gi|1620122695|ref|XM_028672102.1| 5849 g45324 i0 100 0.12962962962963 28 0 13 0 118 145 771 798 Plasmodium gallinaceum conserved Plasmodium protein, unknown function (PGAL8A_00309200), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gallinaceum
23306514 23306514 PRJNA1249042_S_NODE_10279_length_306_cov_3.604563_g10065_i0 PRJNA1249042 10279 306 3.604563 11.02996278 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 385 2.48e-102   NTclustered gi|1624698156|ref|XM_029013946.1| 189622 g10065 i0 90.033 20.4967320261438 301 24 98 5 6 306 121 415 Babesia ovata CTP synthase, putative (BOVATA_050290), partial mRNA blastn 6272 385 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
24581116 24581116 PRJNA1249042_S_NODE_72420_length_185_cov_1.683099_g72206_i0 PRJNA1249042 72420 185 1.683099 3.11373315 Eimeria mitis 44415 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.016   NTclustered gi|916500119|ref|XM_013495420.1| 44415 g72206 i0 100 0.151351351351351 28 0 15 0 158 185 740 767 Eimeria mitis uncharacterized protein (EMH_0039620), partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
26743136 26743136 PRJNA1249042_S_NODE_105361_length_157_cov_3.149123_g105147_i0 PRJNA1249042 105361 157 3.149123 4.94412311 Apicomplexa 5794 SAR_Eukaryotes SAR_Eukaryotes 82.4 1.26e-18   NR XP_067803686.1 323732 g105147 i0 72.5 16.5668789808917 51 14 97.5 0 1 153 54 104 XP_067803686.1 bifunctional Ribosomal protein L31e domain superfamily/Ribosomal protein L31e [Babesia duncani] diamond 2601 82.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia duncani
26947015 26947015 PRJNA1249042_S_NODE_60982_length_197_cov_1.720779_g60768_i0 PRJNA1249042 60982 197 1.720779 3.38993463 Plasmodium falciparum 5833 SAR_Eukaryotes SAR_Eukaryotes 43.1 0.00639   NR AIZ73304.1 5833 g60768 i0 50 1.21827411167513 40 20 60.9 0 122 3 82 121 AIZ73304.1 erythrocyte membrane protein 1, partial [Plasmodium falciparum] diamond 240 43.1 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;