RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1249042", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 4 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 4 ✖

bioproject 1

  • PRJNA1249042 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27547576 27547576 PRJNA1249042_S_NODE_20884_length_262_cov_1.652968_g20670_i0 PRJNA1249042 20884 262 1.652968 4.33077616 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 80.1 6.51e-17   NR MBI3320003.1 2035772 g20670 i0 69.8 0.721374045801527 63 19 72.1 0 74 262 1 63 MBI3320003.1 MFS transporter [Candidatus Omnitrophota bacterium] diamond 189 80.1 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28305346 28305346 PRJNA1249042_S_NODE_30486_length_240_cov_2.862944_g30272_i0 PRJNA1249042 30486 240 2.862944 6.8710656 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 44.7 0.00732   NR NQV04333.1 2035772 g30272 i0 34.4 0.8 64 37 73.8 3 188 12 260 323 NQV04333.1 primosomal protein N' [Candidatus Omnitrophota bacterium] diamond 192 44.7 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
29094860 29094860 PRJNA1249042_S_NODE_93128_length_166_cov_4.577236_g92914_i0 PRJNA1249042 93128 166 4.577236 7.59821176 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 43.1 0.00968   NR MCG8432288.1 2035772 g92914 i0 62.1 0.524096385542169 29 11 52.4 0 13 99 187 215 MCG8432288.1 endonuclease/exonuclease/phosphatase family protein [Candidatus Omnitrophota bacterium] diamond 87 43.1 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
31495937 31495937 PRJNA1249042_S_NODE_4956_length_391_cov_2.589080_g4742_i0 PRJNA1249042 4956 391 2.58908 10.1233028 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 49.3 8.14e-4   NR MCG8432288.1 2035772 g4742 i0 43.8 0.368286445012788 48 26 36.8 1 239 96 183 229 MCG8432288.1 endonuclease/exonuclease/phosphatase family protein [Candidatus Omnitrophota bacterium] diamond 144 49.3 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;