RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA1249042", tax_clade = "Opisthokonta" and tax_phylum = "Hemichordata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Hemichordata · 8 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 8 ✖

bioproject 1

  • PRJNA1249042 · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1629104 1629104 PRJNA1249042_S_NODE_24542_length_253_cov_1.652381_g24328_i0 PRJNA1249042 24542 253 1.652381 4.18052393 Ptychodera flava 63121 Hemichordata other_Eukaryota 54.7 0.006   NTclustered gi|2875736598|ref|XM_070699066.1| 63121 g24328 i0 100 0.114624505928854 29 0 11 0 86 114 1834 1806 PREDICTED: Ptychodera flava histidine N-alpha-methyltransferase-like (LOC139132806), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava
26756980 26756980 PRJNA1249042_S_NODE_37101_length_228_cov_4.318919_g36887_i0 PRJNA1249042 37101 228 4.318919 9.84713532 Saccoglossus kowalevskii 10224 Hemichordata other_Eukaryota 66.2 1.6e-10   NR XP_006826086.1 10224 g36887 i0 43.7 0.934210526315789 71 40 93.4 0 226 14 1029 1099 XP_006826086.1 PREDICTED: uncharacterized protein LOC102808992 [Saccoglossus kowalevskii] diamond 213 66.2 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Harrimaniidae Saccoglossus Saccoglossus kowalevskii
27358313 27358313 PRJNA1249042_S_NODE_63123_length_194_cov_4.000000_g62909_i0 PRJNA1249042 63123 194 4 7.76 Saccoglossus kowalevskii 10224 Hemichordata other_Eukaryota 55.5 6.4e-7   NR XP_006826086.1 10224 g62909 i0 50 0.711340206185567 46 23 71.1 0 1 138 1138 1183 XP_006826086.1 PREDICTED: uncharacterized protein LOC102808992 [Saccoglossus kowalevskii] diamond 138 55.5 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Harrimaniidae Saccoglossus Saccoglossus kowalevskii
27958055 27958055 PRJNA1249042_S_NODE_38725_length_226_cov_1.950820_g38511_i0 PRJNA1249042 38725 226 1.95082 4.4088532 Saccoglossus kowalevskii 10224 Hemichordata other_Eukaryota 43.5 0.0161   NR XP_006820141.1 10224 g38511 i0 34.5 0.730088495575221 55 33 69 1 22 177 261 315 XP_006820141.1 PREDICTED: uncharacterized protein LOC102808971 [Saccoglossus kowalevskii] diamond 165 43.5 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Harrimaniidae Saccoglossus Saccoglossus kowalevskii
28841989 28841989 PRJNA1249042_S_NODE_29228_length_243_cov_1.880000_g29014_i0 PRJNA1249042 29228 243 1.88 4.5684 Saccoglossus kowalevskii 10224 Hemichordata other_Eukaryota 81.3 1.02e-15   NR XP_006826086.1 10224 g29014 i0 55.6 0.888888888888889 72 31 87.7 1 215 3 1118 1189 XP_006826086.1 PREDICTED: uncharacterized protein LOC102808992 [Saccoglossus kowalevskii] diamond 216 81.3 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Harrimaniidae Saccoglossus Saccoglossus kowalevskii
28873653 28873653 PRJNA1249042_S_NODE_5608_length_371_cov_1.774390_g5394_i0 PRJNA1249042 5608 371 1.77439 6.5829869 Saccoglossus kowalevskii 10224 Hemichordata other_Eukaryota 60.5 1.03e-7   NR XP_006826086.1 10224 g5394 i0 41.9 0.695417789757412 86 46 68.7 2 355 101 1143 1225 XP_006826086.1 PREDICTED: uncharacterized protein LOC102808992 [Saccoglossus kowalevskii] diamond 258 60.5 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Harrimaniidae Saccoglossus Saccoglossus kowalevskii
30958439 30958439 PRJNA1249042_S_NODE_23194_length_256_cov_1.544601_g22980_i0 PRJNA1249042 23194 256 1.544601 3.95417856 Saccoglossus kowalevskii 10224 Hemichordata other_Eukaryota 80.9 1.71e-15   NR XP_006826086.1 10224 g22980 i0 46.3 0.9375 80 43 93.8 0 252 13 1133 1212 XP_006826086.1 PREDICTED: uncharacterized protein LOC102808992 [Saccoglossus kowalevskii] diamond 240 80.9 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Harrimaniidae Saccoglossus Saccoglossus kowalevskii
30958443 30958443 PRJNA1249042_S_NODE_41274_length_222_cov_2.100559_g41060_i0 PRJNA1249042 41274 222 2.100559 4.66324098 Saccoglossus kowalevskii 10224 Hemichordata other_Eukaryota 50.4 5.68e-5   NR XP_006826086.1 10224 g41060 i0 34.7 0.972972972972973 72 45 94.6 1 1 210 1102 1173 XP_006826086.1 PREDICTED: uncharacterized protein LOC102808992 [Saccoglossus kowalevskii] diamond 216 50.4 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Harrimaniidae Saccoglossus Saccoglossus kowalevskii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;