RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1249042", tax_clade = "FCB group" and tax_phylum = "Candidatus Latescibacterota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA1249042 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16354766 16354766 PRJNA1249042_S_NODE_84593_length_174_cov_1.274809_g84379_i0 PRJNA1249042 84593 174 1.274809 2.21816766 Bacteria 2 Bacteria Bacteria 182 1.79e-41   NTclustered gi|2518550840|emb|OX638317.1| 199737 g84379 i0 85.955 95.948275862069 178 15 100 7 1 174 3962009 3961838 MAG: uncultured Latescibacteria bacterium isolate cbbe8a84-e08a-4d06-a76e-2eb930d8ff24 genome assembly, chromosome: 1 blastn 16695 182 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         uncultured Latescibacterota bacterium
27705841 27705841 PRJNA1249042_S_NODE_13644_length_287_cov_3.852459_g13430_i0 PRJNA1249042 13644 287 3.852459 11.05655733 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 43.5 0.0335   NR RPJ47797.1 2053570 g13430 i0 38.2 0.574912891986063 55 33 56.4 1 162 1 239 293 RPJ47797.1 MAG: tetratricopeptide repeat protein [Candidatus Latescibacterota bacterium] diamond 165 43.5 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;