contig_metadata
15 rows where bioproject = "PRJNA1249042" and tax_clade = "Amoebozoa"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 354605 | 354605 | PRJNA1249042_S_NODE_7081_length_339_cov_1.912162_g6867_i0 | PRJNA1249042 | 7081 | 339 | 1.912162 | 6.48222918 | Schizoplasmodiopsis amoeboidea | 435420 | Evosea | other_Eukaryota | 593 | 4.239999999999999e-165 | NTclustered | gi|260909292|gb|FJ766478.1| | 435420 | g6867 | i0 | 98.235 | 40.3893805309735 | 340 | 5 | 100 | 1 | 1 | 339 | 953 | 614 | Schizoplasmodiopsis amoeboidea strain BG7A-12B piece G 18S ribosomal RNA gene, partial sequence | blastn | 13692 | 593 | 1 | Eukaryota | Amoebozoa | Evosea | Variosea | Cavosteliida | Schizoplasmodiopsis | Schizoplasmodiopsis amoeboidea | |||
| 1052373 | 1052373 | PRJNA1249042_S_NODE_8201_length_325_cov_2.514184_g7987_i0 | PRJNA1249042 | 8201 | 325 | 2.514184 | 8.171098 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 52.8 | 0.031 | NTclustered | gi|330845719|ref|XM_003294673.1| | 5786 | g7987 | i0 | 94.286 | 0.193846153846154 | 35 | 1 | 10 | 1 | 167 | 200 | 97 | 131 | Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_43851), partial mRNA | blastn | 63 | 52.8 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Dictyosteliales | Dictyosteliaceae | Dictyostelium | Dictyostelium purpureum | ||
| 2905385 | 2905385 | PRJNA1249042_S_NODE_5703_length_368_cov_2.270769_g5489_i0 | PRJNA1249042 | 5703 | 368 | 2.270769 | 8.35642992 | Vannella septentrionalis | 197531 | Discosea | other_Eukaryota | 363 | 1.4199999999999999e-95 | NTclustered | gi|300078499|gb|GU001161.1| | 197531 | g5489 | i0 | 85.095 | 6.81521739130435 | 369 | 39 | 99 | 13 | 1 | 365 | 2465 | 2821 | Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence | blastn | 2508 | 363 | 1 | Eukaryota | Amoebozoa | Discosea | Flabellinia | Vannellidae | Vannella | Vannella septentrionalis | |||
| 4181594 | 4181594 | PRJNA1249042_S_NODE_35664_length_231_cov_2.000000_g35450_i0 | PRJNA1249042 | 35664 | 231 | 2 | 4.62 | Lepidoderma carestianum | 290853 | Evosea | other_Eukaryota | 344 | 3.04e-90 | NTclustered | gi|90968164|emb|AM231296.1| | 290853 | g35450 | i0 | 93.506 | 100.025974025974 | 231 | 15 | 100 | 0 | 1 | 231 | 974 | 1204 | Lepidoderma carestianum partial 18S rRNA gene, isolate K18 | blastn | 23106 | 344 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Physariida | Didymiaceae | Lepidoderma | Lepidoderma carestianum | ||
| 5457521 | 5457521 | PRJNA1249042_S_NODE_100505_length_161_cov_1.593220_g100291_i0 | PRJNA1249042 | 100505 | 161 | 1.59322 | 2.5650842 | Vannella septentrionalis | 197531 | Discosea | other_Eukaryota | 167 | 4.5799999999999995e-37 | NTclustered | gi|300078499|gb|GU001161.1| | 197531 | g100291 | i0 | 89.051 | 49.3354037267081 | 137 | 12 | 84 | 2 | 27 | 161 | 4204 | 4069 | Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence | blastn | 7943 | 167 | 1 | Eukaryota | Amoebozoa | Discosea | Flabellinia | Vannellidae | Vannella | Vannella septentrionalis | |||
| 5457991 | 5457991 | PRJNA1249042_S_NODE_54725_length_204_cov_2.217391_g54511_i0 | PRJNA1249042 | 54725 | 204 | 2.217391 | 4.52347764 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 156 | 1.32e-33 | NTclustered | gi|88601207|gb|DQ384272.1| | 5778 | g54511 | i0 | 93.333 | 0.514705882352941 | 105 | 7 | 51 | 0 | 97 | 201 | 357 | 253 | Hartmannella vermiformis unknown mRNA | blastn | 105 | 156 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 13108060 | 13108060 | PRJNA1249042_S_NODE_10991_length_302_cov_1.081081_g10777_i0 | PRJNA1249042 | 10991 | 302 | 1.081081 | 3.26486462 | Didymium iridis | 5793 | Evosea | other_Eukaryota | 448 | 3.0699999999999995e-121 | NTclustered | gi|2687|emb|X60210.1| | 5793 | g10777 | i0 | 93.399 | 12.3443708609272 | 303 | 19 | 100 | 1 | 1 | 302 | 1726 | 2028 | D.iridis LSU rRNA gene | blastn | 3728 | 448 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Physariida | Didymiaceae | Didymium | Didymium iridis | ||
| 17629877 | 17629877 | PRJNA1249042_S_NODE_101894_length_160_cov_1.606838_g101680_i0 | PRJNA1249042 | 101894 | 160 | 1.606838 | 2.5709408 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 296 | 5.55e-76 | NTclustered | gi|441475832|emb|FN562422.4| | 1089205 | g101680 | i0 | 100 | 11.5875 | 160 | 0 | 100 | 0 | 1 | 160 | 305 | 464 | Amoebozoa sp. SZA19 18S rRNA gene, isolate SZA19 | blastn | 1854 | 296 | 1 | Eukaryota | Amoebozoa | Amoebozoa sp. SZA19 | |||||||
| 23307214 | 23307214 | PRJNA1249042_S_NODE_89619_length_169_cov_2.984127_g89405_i0 | PRJNA1249042 | 89619 | 169 | 2.984127 | 5.04317463 | uncultured Soliformovum | 2510342 | Evosea | other_Eukaryota | 276 | 7.69e-70 | NTclustered | gi|1564356923|gb|MK443523.1| | 2510342 | g89405 | i0 | 99.342 | 1.35502958579882 | 152 | 1 | 90 | 0 | 18 | 169 | 92 | 243 | Uncultured Soliformovum clone OTUA345 small subunit ribosomal RNA gene, partial sequence; mitochondrial | blastn | 229 | 276 | 1 | Eukaryota | Amoebozoa | Evosea | Variosea | Protosteliida | Protosteliaceae | uncultured Soliformovum | |||
| 27453081 | 27453081 | PRJNA1249042_S_NODE_43683_length_218_cov_4.045714_g43469_i0 | PRJNA1249042 | 43683 | 218 | 4.045714 | 8.81965652 | Dictyostelium discoideum AX4 | 352472 | Evosea | other_Eukaryota | 102 | 2.95e-23 | NR | XP_636395.1 | 352472 | g43469 | i0 | 71 | 1.84403669724771 | 69 | 18 | 92.2 | 1 | 217 | 17 | 460 | 528 | XP_636395.1 methylmalonate-semialdehyde dehydrogenase [Dictyostelium discoideum AX4] | diamond | 402 | 102 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Dictyosteliales | Dictyosteliaceae | Dictyostelium | Dictyostelium discoideum | ||
| 27768862 | 27768862 | PRJNA1249042_S_NODE_50324_length_209_cov_3.837349_g50110_i0 | PRJNA1249042 | 50324 | 209 | 3.837349 | 8.02005941 | Planoprotostelium fungivorum | 1890364 | Evosea | other_Eukaryota | 73.6 | 1.4e-14 | NR | PRP84262.1 | 1890364 | g50110 | i0 | 56.5 | 4.95215311004785 | 69 | 29 | 99 | 1 | 3 | 209 | 44 | 111 | PRP84262.1 ribosomal protein L36, component of cytosolic 80S ribosome and 60S large subunit [Planoprotostelium fungivorum] | diamond | 1035 | 73.6 | 1 | Eukaryota | Amoebozoa | Evosea | Variosea | Cavosteliida | Cavosteliaceae | Planoprotostelium | Planoprotostelium fungivorum | ||
| 29063267 | 29063267 | PRJNA1249042_S_NODE_115028_length_151_cov_2.046296_g114814_i0 | PRJNA1249042 | 115028 | 151 | 2.046296 | 3.08990696 | Planoprotostelium fungivorum | 1890364 | Evosea | other_Eukaryota | 68.9 | 5.85e-12 | NR | PRP88073.1 | 1890364 | g114814 | i0 | 66.7 | 0.834437086092715 | 42 | 14 | 83.4 | 0 | 140 | 15 | 1012 | 1053 | PRP88073.1 hypothetical protein PROFUN_04164 [Planoprotostelium fungivorum] | diamond | 126 | 68.9 | 1 | Eukaryota | Amoebozoa | Evosea | Variosea | Cavosteliida | Cavosteliaceae | Planoprotostelium | Planoprotostelium fungivorum | ||
| 29789200 | 29789200 | PRJNA1249042_S_NODE_71491_length_186_cov_1.496503_g71277_i0 | PRJNA1249042 | 71491 | 186 | 1.496503 | 2.78349558 | Planoprotostelium fungivorum | 1890364 | Evosea | other_Eukaryota | 51.2 | 5.34e-6 | NR | PRP89573.1 | 1890364 | g71277 | i0 | 55 | 0.645161290322581 | 40 | 18 | 64.5 | 0 | 4 | 123 | 106 | 145 | PRP89573.1 hypothetical protein PROFUN_00837 [Planoprotostelium fungivorum] | diamond | 120 | 51.2 | 1 | Eukaryota | Amoebozoa | Evosea | Variosea | Cavosteliida | Cavosteliaceae | Planoprotostelium | Planoprotostelium fungivorum | ||
| 30863472 | 30863472 | PRJNA1249042_S_NODE_67674_length_190_cov_1.306122_g67460_i0 | PRJNA1249042 | 67674 | 190 | 1.306122 | 2.4816318 | Polysphondylium violaceum | 133409 | Evosea | other_Eukaryota | 68.2 | 2.1e-13 | NR | KAF2077835.1 | 133409 | g67460 | i0 | 59.3 | 0.931578947368421 | 59 | 23 | 91.6 | 1 | 179 | 6 | 5 | 63 | KAF2077835.1 hypothetical protein CYY_000880 [Polysphondylium violaceum] | diamond | 177 | 68.2 | 1 | Eukaryota | Amoebozoa | Evosea | Eumycetozoa | Dictyosteliales | Dictyosteliaceae | Polysphondylium | Polysphondylium violaceum | ||
| 32318614 | 32318614 | PRJNA1249042_S_NODE_97199_length_163_cov_2.741667_g96985_i0 | PRJNA1249042 | 97199 | 163 | 2.741667 | 4.46891721 | Entamoeba histolytica HM-3:IMSS | 885315 | Evosea | other_Eukaryota | 60.8 | 5.19e-9 | NR | EMS17201.1 | 885315 | g96985 | i0 | 50 | 1.98773006134969 | 54 | 27 | 99.4 | 0 | 162 | 1 | 1509 | 1562 | EMS17201.1 Leucine-rich repeat containing protein [Entamoeba histolytica HM-3:IMSS] | diamond | 324 | 60.8 | 1 | Eukaryota | Amoebozoa | Evosea | Mastigamoebida | Entamoebidae | Entamoeba | Entamoeba histolytica |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;